RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 OTUB2Q96DC9 234 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 MSANTD3Q96H12 275 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 TBC1D17Q9HA65 648 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 ADAM22Q9P0K1 906 aa15.49■□□□□ 0.07
COL9A1-204ENST00000370496 BZW2Q9Y6E2 419 aaKnown RBP15.49■□□□□ 0.07
COL9A1-204ENST00000370496 ADH1CP00326 375 aa15.48■□□□□ 0.07
COL9A1-204ENST00000370496 PDGFBP01127 241 aaPredicted RBP15.48■□□□□ 0.07
COL9A1-204ENST00000370496 SERPING1P05155 500 aa15.48■□□□□ 0.07
COL9A1-204ENST00000370496 CALB1P05937 261 aa15.48■□□□□ 0.07
COL9A1-204ENST00000370496 CTHP32929 405 aa15.48■□□□□ 0.07
COL9A1-204ENST00000370496 SCNN1AP37088 669 aa15.48■□□□□ 0.07
COL9A1-204ENST00000370496 HARS2P49590 506 aaKnown RBP15.48■□□□□ 0.07
COL9A1-204ENST00000370496 RNASE9P60153 205 aaKnown RBP15.48■□□□□ 0.07
COL9A1-204ENST00000370496 NR1H3Q13133 447 aa15.48■□□□□ 0.07
COL9A1-204ENST00000370496 TSR1Q2NL82 804 aaKnown RBP15.48■□□□□ 0.07
COL9A1-204ENST00000370496 ZNF571Q7Z3V5 609 aaPredicted RBP15.48■□□□□ 0.07
COL9A1-204ENST00000370496 PHF13Q86YI8 300 aaPredicted RBP15.48■□□□□ 0.07
COL9A1-204ENST00000370496 SUGP1Q8IWZ8 645 aaKnown RBP15.48■□□□□ 0.07
COL9A1-204ENST00000370496 DEFB106AQ8N104 65 aa15.48■□□□□ 0.07
COL9A1-204ENST00000370496 ADAM32Q8TC27 787 aa15.48■□□□□ 0.07
COL9A1-204ENST00000370496 WBP2Q969T9 261 aa15.48■□□□□ 0.07
COL9A1-204ENST00000370496 SLC2A13Q96QE2 648 aa15.48■□□□□ 0.07
COL9A1-204ENST00000370496 SYT11Q9BT88 431 aa15.48■□□□□ 0.07
COL9A1-204ENST00000370496 DCLK3Q9C098 648 aa15.48■□□□□ 0.07
COL9A1-204ENST00000370496 C8orf33Q9H7E9 229 aaPredicted RBP15.48■□□□□ 0.07
COL9A1-204ENST00000370496 ECT2Q9H8V3 914 aa15.48■□□□□ 0.07
COL9A1-204ENST00000370496 METTL5Q9NRN9 209 aaKnown RBP15.48■□□□□ 0.07
COL9A1-204ENST00000370496 TMCO5BA8MYB1 307 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 PRR33A8MZF0 331 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 SPECC1L-ADORA2AF8WAN1 911 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 MAN2B1O00754 1011 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 MFAP3LO75121 409 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 CYP17A1P05093 508 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 FYNP06241 537 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 ZNF75DP51815 510 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 TBX4P57082 545 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 CDK17Q00537 523 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 AMPD2Q01433 879 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 UBXN2BQ14CS0 331 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 TRIP4Q15650 581 aaPredicted RBP15.47■□□□□ 0.07
COL9A1-204ENST00000370496 SYPL2Q5VXT5 272 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 NUGGCQ68CJ6 796 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 C1orf228Q6PIY5 440 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 ZNF852Q6ZMS4 543 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 HTR3DQ70Z44 454 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 MON1BQ7L1V2 547 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 DENND1CQ8IV53 801 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 CNGA4Q8IV77 575 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 MRFAP1L1Q96HT8 127 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.47■□□□□ 0.07
COL9A1-204ENST00000370496 LINC00597Q9H2U6 94 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 C11orf16Q9NQ32 467 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 ZNHIT6Q9NWK9 470 aaKnown RBP15.47■□□□□ 0.07
COL9A1-204ENST00000370496 STAP1Q9ULZ2 295 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 ZNF510Q9Y2H8 683 aa15.47■□□□□ 0.07
COL9A1-204ENST00000370496 MRPS17Q9Y2R5 130 aaKnown RBP15.47■□□□□ 0.07
COL9A1-204ENST00000370496 KIAA1549LQ6ZVL6 1849 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 KMT2EQ8IZD2 1858 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 SYNJ2BP-COX16A0A087WUM0 186 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 GPR37L1O60883 481 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 TRUB2O95900 331 aaKnown RBP15.46■□□□□ 0.07
COL9A1-204ENST00000370496 ADH5P11766 374 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 GLULP15104 373 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 SULT1E1P49888 294 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 NNTQ13423 1086 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 HGSNATQ68CP4 663 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 ACAD10Q6JQN1 1059 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 DNAJC24Q6P3W2 148 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 Q6ZNB5 142 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 PHLDB2Q86SQ0 1253 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 RALGPS2Q86X27 583 aaPredicted RBP15.46■□□□□ 0.07
COL9A1-204ENST00000370496 DNAJC7Q99615 494 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 FOXQ1Q9C009 403 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 ABHD10Q9NUJ1 306 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 DDIT4Q9NX09 232 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.46■□□□□ 0.07
COL9A1-204ENST00000370496 COX16Q9P0S2 106 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 WDR35Q9P2L0 1181 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 NDRG2Q9UN36 371 aaKnown RBP15.46■□□□□ 0.07
COL9A1-204ENST00000370496 TLR6Q9Y2C9 796 aa15.46■□□□□ 0.07
COL9A1-204ENST00000370496 KANSL1LA0AUZ9 987 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 OTOL1A6NHN0 477 aaPredicted RBP15.45■□□□□ 0.06
COL9A1-204ENST00000370496 IRAK2O43187 625 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 GREM1O60565 184 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 APOEP02649 317 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 PLEKP08567 350 aaPredicted RBP15.45■□□□□ 0.06
COL9A1-204ENST00000370496 CD72P21854 359 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 GBP1P32455 592 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 NOS2P35228 1153 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 MATKP42679 507 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 VCPP55072 806 aaKnown RBP15.45■□□□□ 0.06
COL9A1-204ENST00000370496 MLLT6P55198 1093 aaPredicted RBP15.45■□□□□ 0.06
COL9A1-204ENST00000370496 STARD6P59095 220 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 RING1Q06587 406 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 DHCR24Q15392 516 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 CWF19L1Q69YN2 538 aaKnown RBP15.45■□□□□ 0.06
COL9A1-204ENST00000370496 UNC45BQ8IWX7 931 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 FBXL6Q8N531 539 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 C3orf20Q8ND61 904 aa15.45■□□□□ 0.06
COL9A1-204ENST00000370496 OR8K1Q8NGG5 319 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms