RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 PENKP01210 267 aaPredicted RBP16.93■□□□□ 0.3
VMA21-202ENST00000370361 BCKDHBP21953 392 aa16.93■□□□□ 0.3
VMA21-202ENST00000370361 EIF4HQ15056 248 aaKnown RBP16.93■□□□□ 0.3
VMA21-202ENST00000370361 MAP7D1Q3KQU3 841 aa16.93■□□□□ 0.3
VMA21-202ENST00000370361 CBWD6Q4V339 395 aa16.93■□□□□ 0.3
VMA21-202ENST00000370361 CBWD3Q5JTY5 395 aa16.93■□□□□ 0.3
VMA21-202ENST00000370361 CBWD5Q5RIA9 395 aa16.93■□□□□ 0.3
VMA21-202ENST00000370361 ANKRD40Q6AI12 368 aa16.93■□□□□ 0.3
VMA21-202ENST00000370361 TPGS1Q6ZTW0 290 aa16.93■□□□□ 0.3
VMA21-202ENST00000370361 MIB1Q86YT6 1006 aa16.93■□□□□ 0.3
VMA21-202ENST00000370361 WBP2Q969T9 261 aa16.93■□□□□ 0.3
VMA21-202ENST00000370361 SLC35C1Q96A29 364 aa16.93■□□□□ 0.3
VMA21-202ENST00000370361 NUSAP1Q9BXS6 441 aaKnown RBP16.93■□□□□ 0.3
VMA21-202ENST00000370361 IRX2Q9BZI1 471 aaPredicted RBP16.93■□□□□ 0.3
VMA21-202ENST00000370361 LRRC4Q9HBW1 653 aa16.93■□□□□ 0.3
VMA21-202ENST00000370361 TMEM9BQ9NQ34 198 aa16.93■□□□□ 0.3
VMA21-202ENST00000370361 MARCH2Q9P0N8 246 aa16.93■□□□□ 0.3
VMA21-202ENST00000370361 CNOT1A5YKK6 2376 aaKnown RBP16.93■□□□□ 0.3
VMA21-202ENST00000370361 ABCA7Q8IZY2 2146 aa16.93■□□□□ 0.3
VMA21-202ENST00000370361 BICDL2A1A5D9 508 aa16.92■□□□□ 0.3
VMA21-202ENST00000370361 LATS1O95835 1130 aa16.92■□□□□ 0.3
VMA21-202ENST00000370361 PAEPP09466 180 aa16.92■□□□□ 0.3
VMA21-202ENST00000370361 VDRP11473 427 aa16.92■□□□□ 0.3
VMA21-202ENST00000370361 TKTL1P51854 596 aa16.92■□□□□ 0.3
VMA21-202ENST00000370361 YWHAGP61981 247 aaKnown RBP eCLIP16.92■□□□□ 0.3
VMA21-202ENST00000370361 PEAR1Q5VY43 1037 aaPredicted RBP16.92■□□□□ 0.3
VMA21-202ENST00000370361 LYSMD4Q5XG99 296 aa16.92■□□□□ 0.3
VMA21-202ENST00000370361 KCTD13Q8WZ19 329 aa16.92■□□□□ 0.3
VMA21-202ENST00000370361 EEF2KMTQ96G04 330 aa16.92■□□□□ 0.3
VMA21-202ENST00000370361 IPO9Q96P70 1041 aaKnown RBP16.92■□□□□ 0.3
VMA21-202ENST00000370361 ARID3AQ99856 593 aa16.92■□□□□ 0.3
VMA21-202ENST00000370361 RASAL2Q9UJF2 1139 aa16.92■□□□□ 0.3
VMA21-202ENST00000370361 TSPAN16Q9UKR8 245 aa16.92■□□□□ 0.3
VMA21-202ENST00000370361 INVSQ9Y283 1065 aa16.92■□□□□ 0.3
VMA21-202ENST00000370361 HBS1LQ9Y450 684 aaKnown RBP16.92■□□□□ 0.3
VMA21-202ENST00000370361 TIMM44O43615 452 aa16.91■□□□□ 0.3
VMA21-202ENST00000370361 GNA14O95837 355 aa16.91■□□□□ 0.3
VMA21-202ENST00000370361 CISD3P0C7P0 127 aa16.91■□□□□ 0.3
VMA21-202ENST00000370361 GABRG2P18507 467 aa16.91■□□□□ 0.3
VMA21-202ENST00000370361 CORO1AP31146 461 aaKnown RBP16.91■□□□□ 0.3
VMA21-202ENST00000370361 HARS2P49590 506 aaKnown RBP16.91■□□□□ 0.3
VMA21-202ENST00000370361 SHC2P98077 582 aa16.91■□□□□ 0.3
VMA21-202ENST00000370361 EFEMP1Q12805 493 aa16.91■□□□□ 0.3
VMA21-202ENST00000370361 STARD3Q14849 445 aa16.91■□□□□ 0.3
VMA21-202ENST00000370361 GOLGA7BQ2TAP0 167 aa16.91■□□□□ 0.3
VMA21-202ENST00000370361 EGFLAMQ63HQ2 1017 aa16.91■□□□□ 0.3
VMA21-202ENST00000370361 METTL3Q86U44 580 aaKnown RBP16.91■□□□□ 0.3
VMA21-202ENST00000370361 FAM217AQ8IXS0 508 aa16.91■□□□□ 0.3
VMA21-202ENST00000370361 SIX6OS1Q8N1H7 587 aa16.91■□□□□ 0.3
VMA21-202ENST00000370361 IPO4Q8TEX9 1081 aaKnown RBP16.91■□□□□ 0.3
VMA21-202ENST00000370361 PIGKQ92643 395 aa16.91■□□□□ 0.3
VMA21-202ENST00000370361 TATDN2Q93075 761 aa16.91■□□□□ 0.3
VMA21-202ENST00000370361 CNGB3Q9NQW8 809 aa16.91■□□□□ 0.3
VMA21-202ENST00000370361 RXFP3Q9NSD7 469 aa16.91■□□□□ 0.3
VMA21-202ENST00000370361 ANGPTL2Q9UKU9 493 aa16.91■□□□□ 0.3
VMA21-202ENST00000370361 CIZ1Q9ULV3 898 aaPredicted RBP16.91■□□□□ 0.3
VMA21-202ENST00000370361 A0A1W2PQF6 199 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 MDM4O15151 490 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 KCNK5O95279 499 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 CSRP1P21291 193 aaKnown RBP16.9■□□□□ 0.3
VMA21-202ENST00000370361 PMLP29590 882 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 FMO5P49326 533 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 RPL6Q02878 288 aaKnown RBP16.9■□□□□ 0.3
VMA21-202ENST00000370361 PDE4CQ08493 712 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 FYB2Q5VWT5 728 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 SMYD5Q6GMV2 418 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 TCEAL6Q6IPX3 200 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 SLC23A3Q6PIS1 610 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 ANKS1BQ7Z6G8 1248 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 ZNF557Q8N988 423 aaPredicted RBP16.9■□□□□ 0.3
VMA21-202ENST00000370361 RNF139Q8WU17 664 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 IRGQQ8WZA9 623 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 TCEAL3Q969E4 200 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 NT5C1BQ96P26 610 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 SMOC1Q9H4F8 434 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 ABCC13Q9NSE7 274 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 CALCOCO1Q9P1Z2 691 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 NUDT5Q9UKK9 219 aa16.9■□□□□ 0.3
VMA21-202ENST00000370361 AGO1Q9UL18 857 aaKnown RBP16.9■□□□□ 0.3
VMA21-202ENST00000370361 TPRP12270 2363 aaKnown RBP16.9■□□□□ 0.3
VMA21-202ENST00000370361 TNRC6BQ9UPQ9 1833 aaKnown RBP16.89■□□□□ 0.29
VMA21-202ENST00000370361 ACACBO00763 2458 aa16.89■□□□□ 0.29
VMA21-202ENST00000370361 C4orf47A7E2U8 309 aa16.89■□□□□ 0.29
VMA21-202ENST00000370361 PRRT4C9JH25 899 aa16.89■□□□□ 0.29
VMA21-202ENST00000370361 O00370 1275 aa16.89■□□□□ 0.29
VMA21-202ENST00000370361 KLKB1P03952 638 aa16.89■□□□□ 0.29
VMA21-202ENST00000370361 CD19P15391 556 aa16.89■□□□□ 0.29
VMA21-202ENST00000370361 PMS1P54277 932 aaKnown RBP16.89■□□□□ 0.29
VMA21-202ENST00000370361 MFAP3P55082 362 aa16.89■□□□□ 0.29
VMA21-202ENST00000370361 TRIP4Q15650 581 aaPredicted RBP16.89■□□□□ 0.29
VMA21-202ENST00000370361 DUOXA1Q1HG43 343 aa16.89■□□□□ 0.29
VMA21-202ENST00000370361 TRIM61Q5EBN2 209 aa16.89■□□□□ 0.29
VMA21-202ENST00000370361 LCLAT1Q6UWP7 414 aa16.89■□□□□ 0.29
VMA21-202ENST00000370361 UBR7Q8N806 425 aa16.89■□□□□ 0.29
VMA21-202ENST00000370361 RLN3Q8WXF3 142 aa16.89■□□□□ 0.29
VMA21-202ENST00000370361 FOXJ1Q92949 421 aa16.89■□□□□ 0.29
VMA21-202ENST00000370361 ULBP1Q9BZM6 244 aa16.89■□□□□ 0.29
VMA21-202ENST00000370361 CD248Q9HCU0 757 aa16.89■□□□□ 0.29
VMA21-202ENST00000370361 SUSD2Q9UGT4 822 aa16.89■□□□□ 0.29
VMA21-202ENST00000370361 MBD1Q9UIS9 605 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms