RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 ELK3P41970 407 aa13.66□□□□□ -0.22
ECM1-202ENST00000369047 PDK4Q16654 411 aa13.66□□□□□ -0.22
ECM1-202ENST00000369047 RNF43Q68DV7 783 aa13.66□□□□□ -0.22
ECM1-202ENST00000369047 NECAB2Q7Z6G3 386 aa13.66□□□□□ -0.22
ECM1-202ENST00000369047 TMEM40Q8WWA1 233 aa13.66□□□□□ -0.22
ECM1-202ENST00000369047 RAB6BQ9NRW1 208 aa13.66□□□□□ -0.22
ECM1-202ENST00000369047 IPPQ9Y573 584 aa13.66□□□□□ -0.22
ECM1-202ENST00000369047 IKBKGQ9Y6K9 419 aa13.66□□□□□ -0.22
ECM1-202ENST00000369047 SPTLC1O15269 473 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 TM9SF1O15321 606 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 CCDC130P13994 396 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 RBL1P28749 1068 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 HNRNPH1P31943 449 aaKnown RBP13.65□□□□□ -0.22
ECM1-202ENST00000369047 RPA3P35244 121 aaPredicted RBP13.65□□□□□ -0.22
ECM1-202ENST00000369047 MATKP42679 507 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 LILRA4P59901 499 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 ADCY1Q08828 1119 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 HIC1Q14526 733 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 CA9Q16790 459 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 GNASQ5JWF2 1037 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 HHATQ5VTY9 493 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 FBXW10Q5XX13 1052 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 TAF2Q6P1X5 1199 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 ADGRF2Q8IZF7 708 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 DCAKDQ8WVC6 231 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 WDR83Q9BRX9 315 aaKnown RBP13.65□□□□□ -0.22
ECM1-202ENST00000369047 DUSP16Q9BY84 665 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 GPATCH2LQ9NWQ4 482 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 KLK14Q9P0G3 267 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 PHF24Q9UPV7 400 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 A0A1W2PPM1 405 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 HACD1B0YJ81 288 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 ZNF189O75820 626 aaPredicted RBP13.65□□□□□ -0.22
ECM1-202ENST00000369047 PGK1P00558 417 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 LCP1P13796 627 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 KRT4P19013 534 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 FOXN2P32314 431 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 ZNF200P98182 395 aaPredicted RBP13.65□□□□□ -0.22
ECM1-202ENST00000369047 SLC25A52Q3SY17 297 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 SLC45A4Q5BKX6 768 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 PPP6R3Q5H9R7 873 aaPredicted RBP13.65□□□□□ -0.22
ECM1-202ENST00000369047 SMG8Q8ND04 991 aaKnown RBP13.65□□□□□ -0.22
ECM1-202ENST00000369047 SLC2A14Q8TDB8 520 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 KCTD13Q8WZ19 329 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 APBB2Q92870 758 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 PAIP2Q9BPZ3 127 aaKnown RBP13.65□□□□□ -0.22
ECM1-202ENST00000369047 RNF39Q9H2S5 420 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 DHX35Q9H5Z1 703 aaKnown RBP13.65□□□□□ -0.22
ECM1-202ENST00000369047 C11orf49Q9H6J7 331 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 SLC40A1Q9NP59 571 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 SLC38A7Q9NVC3 462 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 ETNK2Q9NVF9 386 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 AP4E1Q9UPM8 1137 aa13.65□□□□□ -0.22
ECM1-202ENST00000369047 CFAP73A6NFT4 308 aa13.64□□□□□ -0.23
ECM1-202ENST00000369047 FAM155BO75949 473 aa13.64□□□□□ -0.23
ECM1-202ENST00000369047 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
ECM1-202ENST00000369047 CCDC15Q0P6D6 951 aa13.64□□□□□ -0.23
ECM1-202ENST00000369047 SEPT7Q16181 437 aaKnown RBP13.64□□□□□ -0.23
ECM1-202ENST00000369047 GALNTL6Q49A17 601 aa13.64□□□□□ -0.23
ECM1-202ENST00000369047 SUGP1Q8IWZ8 645 aaKnown RBP13.64□□□□□ -0.23
ECM1-202ENST00000369047 C4orf33Q8N1A6 199 aa13.64□□□□□ -0.23
ECM1-202ENST00000369047 B3GALNT2Q8NCR0 500 aa13.64□□□□□ -0.23
ECM1-202ENST00000369047 LRRC8CQ8TDW0 803 aa13.64□□□□□ -0.23
ECM1-202ENST00000369047 MZB1Q8WU39 189 aa13.64□□□□□ -0.23
ECM1-202ENST00000369047 SLC44A1Q8WWI5 657 aa13.64□□□□□ -0.23
ECM1-202ENST00000369047 LENG1Q96BZ8 264 aaPredicted RBP13.64□□□□□ -0.23
ECM1-202ENST00000369047 GLT1D1Q96MS3 346 aa13.64□□□□□ -0.23
ECM1-202ENST00000369047 RXFP1Q9HBX9 757 aa13.64□□□□□ -0.23
ECM1-202ENST00000369047 KLC4Q9NSK0 619 aa13.64□□□□□ -0.23
ECM1-202ENST00000369047 CHMP2BQ9UQN3 213 aa13.64□□□□□ -0.23
ECM1-202ENST00000369047 TCRBV9S1A1TA0A576 114 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 TPSB2P20231 275 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 ARL4AP40617 200 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 SOX4Q06945 474 aaPredicted RBP13.63□□□□□ -0.23
ECM1-202ENST00000369047 TPSAB1Q15661 275 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 SPRED3Q2MJR0 410 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 LGSNQ5TDP6 509 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 HACE1Q8IYU2 909 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 VPS52Q8N1B4 723 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 TAB3Q8N5C8 712 aaPredicted RBP13.63□□□□□ -0.23
ECM1-202ENST00000369047 BANPQ8N9N5 519 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 MRRFQ96E11 262 aaKnown RBP13.63□□□□□ -0.23
ECM1-202ENST00000369047 LPIN3Q9BQK8 851 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 MTG1Q9BT17 334 aaPredicted RBP13.63□□□□□ -0.23
ECM1-202ENST00000369047 VPS11Q9H270 941 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 MTMR10Q9NXD2 777 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 M0QZ92 97 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 MT-ND3P03897 115 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 INHBAP08476 426 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 PTPN1P18031 435 aaKnown RBP13.63□□□□□ -0.23
ECM1-202ENST00000369047 EN2P19622 333 aaPredicted RBP13.63□□□□□ -0.23
ECM1-202ENST00000369047 NOS2P35228 1153 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 ACLYP53396 1101 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 YWHAGP61981 247 aaKnown RBP eCLIP13.63□□□□□ -0.23
ECM1-202ENST00000369047 YWHAZP63104 245 aaKnown RBP13.63□□□□□ -0.23
ECM1-202ENST00000369047 SARNPP82979 210 aaKnown RBP13.63□□□□□ -0.23
ECM1-202ENST00000369047 PURAQ00577 322 aaKnown RBP13.63□□□□□ -0.23
ECM1-202ENST00000369047 KCNA10Q16322 511 aa13.63□□□□□ -0.23
ECM1-202ENST00000369047 TWF2Q6IBS0 349 aaKnown RBP13.63□□□□□ -0.23
ECM1-202ENST00000369047 IGDCC3Q8IVU1 814 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms