RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 PROS1P07225 676 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 TRIM49P0CI25 452 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 TRIM49CP0CI26 452 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 RARGP13631 454 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 CD58P19256 250 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 DPP6P42658 865 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 GCLMP48507 274 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 ATXN3P54252 364 aaPredicted RBP10.9□□□□□ -0.66
CLRN3-201ENST00000368671 SPDYCQ5MJ68 293 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 C1orf220Q5T0J3 134 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 KIAA1211LQ6NV74 962 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 SLC23A3Q6PIS1 610 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 SLC36A4Q6YBV0 504 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 TOGARAM2Q6ZUX3 1019 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 IPO4Q8TEX9 1081 aaKnown RBP10.9□□□□□ -0.66
CLRN3-201ENST00000368671 BHMTQ93088 406 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 CYFIP2Q96F07 1278 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 HNRNPABQ99729 332 aaKnown RBP10.9□□□□□ -0.66
CLRN3-201ENST00000368671 IMPG2Q9BZV3 1241 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 SLC32A1Q9H598 525 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 APOBEC3GQ9HC16 384 aaKnown RBP10.9□□□□□ -0.66
CLRN3-201ENST00000368671 SLC24A3Q9HC58 644 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 CYLDQ9NQC7 956 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 WDR35Q9P2L0 1181 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 PILRBQ9UKJ0 227 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 RCOR1Q9UKL0 485 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 CYP8B1Q9UNU6 501 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 SCML2Q9UQR0 700 aa10.9□□□□□ -0.66
CLRN3-201ENST00000368671 SDK1Q7Z5N4 2213 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 NCOR2Q9Y618 2525 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 IGHV1OR15-9A0A0B4J2B8 117 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 IKBKBO14920 756 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 NDUFV2P19404 249 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 NR2F2P24468 414 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 PLA2G4AP47712 749 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 DGKGP49619 791 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 ZNF33AQ06730 810 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 PPP3CAQ08209 521 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 INCA1Q0VD86 236 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 DUOXA1Q1HG43 343 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 ZNF394Q53GI3 561 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 C10orf120Q5SQS8 335 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 PEAR1Q5VY43 1037 aaPredicted RBP10.89□□□□□ -0.67
CLRN3-201ENST00000368671 KIAA1324Q6UXG2 1013 aaKnown RBP10.89□□□□□ -0.67
CLRN3-201ENST00000368671 PARP9Q8IXQ6 854 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 HDDC3Q8N4P3 179 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 TAS1R2Q8TE23 839 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 TMEM174Q8WUU8 243 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 CCDC47Q96A33 483 aaKnown RBP10.89□□□□□ -0.67
CLRN3-201ENST00000368671 NT5C1AQ9BXI3 368 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 SLC6A17Q9H1V8 727 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 CD93Q9NPY3 652 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.89□□□□□ -0.67
CLRN3-201ENST00000368671 CACNA2D2Q9NY47 1150 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 PLK2Q9NYY3 685 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 MARK1Q9P0L2 795 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 RASAL2Q9UJF2 1139 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 DNMT3LQ9UJW3 386 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 NAGPAQ9UK23 515 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 SLC6A14Q9UN76 642 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 MAPK8IP1Q9UQF2 711 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 TRAF3IP3Q9Y228 551 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 STARD13Q9Y3M8 1113 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 PCDHA5Q9Y5H7 936 aa10.89□□□□□ -0.67
CLRN3-201ENST00000368671 SPAARA0A1B0GVQ0 90 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 ZNF217O75362 1048 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 STC2O76061 302 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 HMBSP08397 361 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 KRT13P13646 458 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 GFPT1Q06210 699 aaPredicted RBP10.88□□□□□ -0.67
CLRN3-201ENST00000368671 PPP1R26Q5T8A7 1209 aaPredicted RBP10.88□□□□□ -0.67
CLRN3-201ENST00000368671 INTS8Q75QN2 995 aaKnown RBP10.88□□□□□ -0.67
CLRN3-201ENST00000368671 SCD5Q86SK9 330 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 SLC41A1Q8IVJ1 513 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 FAM186BQ8IYM0 893 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 RGL4Q8IZJ4 473 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 CCDC150Q8NCX0 1101 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 OR2I1PQ8NGU4 316 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 CEP76Q8TAP6 659 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 SPATA32Q96LK8 384 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 HSPA12BQ96MM6 686 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 GABRG3Q99928 467 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 SCNM1Q9BWG6 230 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 NIF3L1Q9GZT8 377 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 CYP3A43Q9HB55 503 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 PNPLA8Q9NP80 782 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 USP25Q9UHP3 1055 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 RALYQ9UKM9 306 aaKnown RBP10.88□□□□□ -0.67
CLRN3-201ENST00000368671 ZMIZ1Q9ULJ6 1067 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 WASF3Q9UPY6 502 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 HPSEQ9Y251 543 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 PCDH15Q96QU1 1955 aa10.88□□□□□ -0.67
CLRN3-201ENST00000368671 WASH3PC4AMC7 463 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 MAPK13O15264 365 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 HYAL3O43820 417 aaPredicted RBP10.87□□□□□ -0.67
CLRN3-201ENST00000368671 OPHN1O60890 802 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 NDUFS2O75306 463 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 CILPO75339 1184 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 MYL1P05976 194 aa10.87□□□□□ -0.67
CLRN3-201ENST00000368671 SERPINF2P08697 491 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms