RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 GABRDO14764 452 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 TP73O15350 636 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 ARHGEF15O94989 841 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 FAM200BP0CF97 657 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 RBP3P10745 1247 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 ODC1P11926 461 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 ZFXP17010 805 aaPredicted RBP11.32□□□□□ -0.6
H3F3A-202ENST00000366814 PCSK1P29120 753 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 TAF5Q15542 800 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 ERMARDQ5T6L9 678 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 SH3PXD2AQ5TCZ1 1133 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 WSCD1Q658N2 575 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 TRNP1Q6NT89 227 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 DARS2Q6PI48 645 aaKnown RBP11.32□□□□□ -0.6
H3F3A-202ENST00000366814 LRRC31Q6UY01 552 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 STRADAQ7RTN6 431 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 OSTM1Q86WC4 334 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 PPIL6Q8IXY8 311 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 KCTD13Q8WZ19 329 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 YME1L1Q96TA2 773 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 B3GNT5Q9BYG0 378 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 PHACTR1Q9C0D0 580 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 STAP1Q9ULZ2 295 aa11.32□□□□□ -0.6
H3F3A-202ENST00000366814 HCRTO43612 131 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 FBXO21O94952 628 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 ABHD2P08910 425 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 MATKP42679 507 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 MAGEA4P43358 317 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 SCNN1GP51170 649 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 CLCNKBP51801 687 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 BCAR1P56945 870 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 ADIGQ0VDE8 80 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 GRIK3Q13003 919 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 ADGRE1Q14246 886 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 STAT4Q14765 748 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 NOMO1Q15155 1222 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 CCDC85BQ15834 202 aaPredicted RBP11.31□□□□□ -0.6
H3F3A-202ENST00000366814 KYNUQ16719 465 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 MDH1BQ5I0G3 518 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 PIGZQ86VD9 579 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 FUKQ8N0W3 1084 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 RNF169Q8NCN4 708 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 UHMK1Q8TAS1 419 aaKnown RBP11.31□□□□□ -0.6
H3F3A-202ENST00000366814 BCAS4Q8TDM0 211 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 PTCD2Q8WV60 388 aaKnown RBP11.31□□□□□ -0.6
H3F3A-202ENST00000366814 LPPQ93052 612 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 FAM149B1Q96BN6 582 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 UROC1Q96N76 676 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 LPIN3Q9BQK8 851 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 SYT15Q9BQS2 421 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 DDX23Q9BUQ8 820 aaKnown RBP11.31□□□□□ -0.6
H3F3A-202ENST00000366814 SNRNP25Q9BV90 132 aaKnown RBP11.31□□□□□ -0.6
H3F3A-202ENST00000366814 FTHL17Q9BXU8 183 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 PRDM16Q9HAZ2 1276 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 NINJ2Q9NZG7 142 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 DSEQ9UL01 958 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 CDH9Q9ULB4 789 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 TTC3P53804 2025 aa11.31□□□□□ -0.6
H3F3A-202ENST00000366814 A0A087WUV0 522 aaPredicted RBP11.3□□□□□ -0.6
H3F3A-202ENST00000366814 A0A0U1RQF3 1178 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 LINC01553A4QN01 128 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 H7C0C1 242 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 DAB1O75553 588 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 TCEA3O75764 348 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 ZSCAN5DPP0CG00 497 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 ETS1P14921 441 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 IBSPP21815 317 aaPredicted RBP11.3□□□□□ -0.6
H3F3A-202ENST00000366814 ACAT1P24752 427 aaKnown RBP11.3□□□□□ -0.6
H3F3A-202ENST00000366814 LSP1P33241 339 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 ATP5OP48047 213 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 HDAC4P56524 1084 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 ARL4CP56559 192 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 HTRA4P83105 476 aaPredicted RBP11.3□□□□□ -0.6
H3F3A-202ENST00000366814 GUCY1A3Q02108 690 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 MMRN1Q13201 1228 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 ANKRD20A8PQ5CZ79 823 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 RNASEH2BQ5TBB1 312 aaKnown RBP11.3□□□□□ -0.6
H3F3A-202ENST00000366814 TTC19Q6DKK2 380 aaPredicted RBP11.3□□□□□ -0.6
H3F3A-202ENST00000366814 PPP1R21Q6ZMI0 780 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 AGMOQ6ZNB7 445 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 CYP4V2Q6ZWL3 525 aaPredicted RBP11.3□□□□□ -0.6
H3F3A-202ENST00000366814 MICALL1Q8N3F8 863 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 RIBC1Q8N443 379 aaPredicted RBP11.3□□□□□ -0.6
H3F3A-202ENST00000366814 GSTCDQ8NEC7 633 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 EPS8L3Q8TE67 593 aaKnown RBP11.3□□□□□ -0.6
H3F3A-202ENST00000366814 CENPIQ92674 756 aaPredicted RBP11.3□□□□□ -0.6
H3F3A-202ENST00000366814 KHSRPQ92945 711 aaKnown RBP eCLIP11.3□□□□□ -0.62e-7■■□□□ 12.5
H3F3A-202ENST00000366814 TGS1Q96RS0 853 aaKnown RBP11.3□□□□□ -0.6
H3F3A-202ENST00000366814 EPN3Q9H201 632 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 ADAM7Q9H2U9 754 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 PCDH18Q9HCL0 1135 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 SAYSD1Q9NPB0 183 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 DNAJC17Q9NVM6 304 aaKnown RBP11.3□□□□□ -0.6
H3F3A-202ENST00000366814 SAE1Q9UBE0 346 aaPredicted RBP11.3□□□□□ -0.6
H3F3A-202ENST00000366814 COL6A3P12111 3177 aa11.3□□□□□ -0.6
H3F3A-202ENST00000366814 CASTOR2A6NHX0 329 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 MEIS3P2A8K0S8 358 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 PECAM1P16284 738 aaPredicted RBP11.29□□□□□ -0.6
H3F3A-202ENST00000366814 NOS2P35228 1153 aa11.29□□□□□ -0.6
H3F3A-202ENST00000366814 PHBP35232 272 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms