RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ZNF510Q9Y2H8 683 aa14.34□□□□□ -0.11
TNFRSF1A-202ENST00000366159 PLXND1Q9Y4D7 1925 aa14.33□□□□□ -0.11
TNFRSF1A-202ENST00000366159 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 A0A1W2PQF6 199 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 BCLAF3A2AJT9 711 aaKnown RBP14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 YJEFN3A6XGL0 299 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 E7ENQ6 273 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 GFRA2O00451 464 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 TM4SF5O14894 197 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 RHOBTB1O94844 696 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 GNA14O95837 355 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 SETSIPP0DME0 302 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 CD19P15391 556 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 BCKDHBP21953 392 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 P2RY2P41231 377 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 ZNF132P52740 706 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 LIMK1P53667 647 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 GCNT1Q02742 428 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 PAK1Q13153 545 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 TRIP4Q15650 581 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 CCDC6Q16204 474 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 CNGA2Q16280 664 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 C10orf76Q5T2E6 689 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 GRAMD4Q6IC98 578 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 TMEM270Q6UE05 265 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 NUDT18Q6ZVK8 323 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 C11orf74Q86VG3 221 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 ARHGEF19Q8IW93 802 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 ZNF513Q8N8E2 541 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 TRIML1Q8N9V2 468 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 UBA3Q8TBC4 463 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 GABRG3Q99928 467 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 DCLK3Q9C098 648 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 POLMQ9NP87 494 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 MARCH2Q9P0N8 246 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 HESX1Q9UBX0 185 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 RASAL2Q9UJF2 1139 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 INVSQ9Y283 1065 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 SLC27A6Q9Y2P4 619 aa14.33□□□□□ -0.12
TNFRSF1A-202ENST00000366159 ABCA7Q8IZY2 2146 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 ALDH1A2O94788 518 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 NTSR1P30989 418 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 CORO1AP31146 461 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 CHKAP35790 457 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 MPLP40238 635 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 RPL34P49207 117 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 DGKGP49619 791 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 STX17P56962 302 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 DAOAP59103 153 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 UBE2HP62256 183 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 ADIGQ0VDE8 80 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 ELF2Q15723 593 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 MAP7D1Q3KQU3 841 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 BSPRYQ5W0U4 402 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 EGFLAMQ63HQ2 1017 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 PMF1Q6P1K2 205 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 TRMT11Q7Z4G4 463 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 PPM1KQ8N3J5 372 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 CPXM2Q8N436 756 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 FRMD1Q8N878 549 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 KREMEN1Q96MU8 473 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 ACOX2Q99424 681 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 SRRTQ9BXP5 876 aaKnown RBP14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 LRRC4Q9HBW1 653 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 CNGB3Q9NQW8 809 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 VPS45Q9NRW7 570 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 MBD1Q9UIS9 605 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 STOML2Q9UJZ1 356 aa14.32□□□□□ -0.12
TNFRSF1A-202ENST00000366159 SLC12A8A0AV02 714 aa14.31□□□□□ -0.12
TNFRSF1A-202ENST00000366159 DCDC2BA2VCK2 349 aa14.31□□□□□ -0.12
TNFRSF1A-202ENST00000366159 CALCAP01258 141 aa14.31□□□□□ -0.12
TNFRSF1A-202ENST00000366159 GABRG2P18507 467 aa14.31□□□□□ -0.12
TNFRSF1A-202ENST00000366159 CETN1Q12798 172 aa14.31□□□□□ -0.12
TNFRSF1A-202ENST00000366159 STILQ15468 1287 aa14.31□□□□□ -0.12
TNFRSF1A-202ENST00000366159 RRAGAQ7L523 313 aa14.31□□□□□ -0.12
TNFRSF1A-202ENST00000366159 IRF2BP1Q8IU81 584 aa14.31□□□□□ -0.12
TNFRSF1A-202ENST00000366159 RBBP8NLQ8NC74 664 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF1A-202ENST00000366159 RLN3Q8WXF3 142 aa14.31□□□□□ -0.12
TNFRSF1A-202ENST00000366159 PLD4Q96BZ4 506 aa14.31□□□□□ -0.12
TNFRSF1A-202ENST00000366159 SMOC1Q9H4F8 434 aa14.31□□□□□ -0.12
TNFRSF1A-202ENST00000366159 ABCC13Q9NSE7 274 aa14.31□□□□□ -0.12
TNFRSF1A-202ENST00000366159 OLA1Q9NTK5 396 aaKnown RBP14.31□□□□□ -0.12
TNFRSF1A-202ENST00000366159 PLK2Q9NYY3 685 aa14.31□□□□□ -0.12
TNFRSF1A-202ENST00000366159 RWDD2AQ9UIY3 292 aa14.31□□□□□ -0.12
TNFRSF1A-202ENST00000366159 PCDHB4Q9Y5E5 795 aa14.31□□□□□ -0.12
TNFRSF1A-202ENST00000366159 TNRC6BQ9UPQ9 1833 aaKnown RBP14.31□□□□□ -0.12
TNFRSF1A-202ENST00000366159 TCRBV21S2A2A0A5A6 115 aa14.3□□□□□ -0.12
TNFRSF1A-202ENST00000366159 AFPP02771 609 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-202ENST00000366159 HMBSP08397 361 aa14.3□□□□□ -0.12
TNFRSF1A-202ENST00000366159 GPD2P43304 727 aa14.3□□□□□ -0.12
TNFRSF1A-202ENST00000366159 MFAP3P55082 362 aa14.3□□□□□ -0.12
TNFRSF1A-202ENST00000366159 ENPP2Q13822 863 aa14.3□□□□□ -0.12
TNFRSF1A-202ENST00000366159 MSANTD2Q6P1R3 559 aa14.3□□□□□ -0.12
TNFRSF1A-202ENST00000366159 RSRC2Q7L4I2 434 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-202ENST00000366159 DENND1CQ8IV53 801 aa14.3□□□□□ -0.12
TNFRSF1A-202ENST00000366159 HMGB4Q8WW32 186 aa14.3□□□□□ -0.12
TNFRSF1A-202ENST00000366159 IRGQQ8WZA9 623 aa14.3□□□□□ -0.12
TNFRSF1A-202ENST00000366159 PIWIL1Q96J94 861 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-202ENST00000366159 HSFY1Q96LI6 401 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms