RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 CFHR3Q02985 330 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 PMS2P11Q13670 270 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 E2F2Q14209 437 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 GPR18Q14330 331 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 CPEB4Q17RY0 729 aaKnown RBP eCLIP0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 LY6KQ17RY6 165 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 MTERF2Q49AM1 385 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 PLEKHO1Q53GL0 409 aaPredicted RBP0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 DNTTIP2Q5QJE6 756 aaKnown RBP0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 DEPDC1Q5TB30 811 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 OTUD1Q5VV17 481 aaPredicted RBP0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 ARHGAP17Q68EM7 881 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 PTCHD4Q6ZW05 846 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 UBE2R2Q712K3 238 aaPredicted RBP0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 PDSS2Q86YH6 399 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 NXPE1Q8N323 547 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 PAQR4Q8N4S7 273 aaPredicted RBP0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 FGFBP3Q8TAT2 258 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 SORCS1Q8WY21 1168 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 RAB24Q969Q5 203 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 MFSD3Q96ES6 412 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 HIC2Q96JB3 615 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 ADGRG7Q96K78 797 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 PUS7Q96PZ0 661 aaKnown RBP0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 TUBA1CQ9BQE3 449 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 WDR83Q9BRX9 315 aaKnown RBP0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 MRPL4Q9BYD3 311 aaKnown RBP0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 ACE2Q9BYF1 805 aaPredicted RBP0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 MRPL46Q9H2W6 279 aaKnown RBP0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 ACBD3Q9H3P7 528 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 TASP1Q9H6P5 420 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 GAREM1Q9H706 876 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 ZNF334Q9HCZ1 680 aaPredicted RBP0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 KRCC1Q9NPI7 259 aaPredicted RBP0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 CCM2LQ9NUG4 571 aaPredicted RBP0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 ARL8BQ9NVJ2 186 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 MALT1Q9UDY8 824 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 ZBTB21Q9ULJ3 1066 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 DLGAP4Q9Y2H0 992 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 ABCA7Q8IZY2 2146 aa0.2□□□□□ -2.38
RNU6-340P-201ENST00000364005 A0A0U1RQF3 1178 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 ZNF891A8MT65 544 aaPredicted RBP0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 FAM171A2A8MVW0 826 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 CLGNO14967 610 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 DCLK1O15075 740 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 KLF4O43474 513 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 RAB11FIP3O75154 756 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 WDR47O94967 919 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 F2P00734 622 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 JMJD7P0C870 316 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 ARSBP15848 533 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 ST6GAL1P15907 406 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 ACADSP16219 412 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 ZNF26P17031 533 aaPredicted RBP0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 KPNA1P52294 538 aaPredicted RBP0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 ZNF280AP59817 542 aaPredicted RBP0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 RAE1P78406 368 aaKnown RBP0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 TCF15Q12870 199 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 MALLQ13021 153 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 MTA1Q13330 715 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 CFAP100Q494V2 611 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 ZC3H12BQ5HYM0 836 aaKnown RBP0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 DENND2CQ68D51 928 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 LAYNQ6UX15 382 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 RBM44Q6ZP01 1051 aaKnown RBP0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 PPP1R32Q7Z5V6 425 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 TFAP2DQ7Z6R9 452 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 LRRTM1Q86UE6 522 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 SERINC5Q86VE9 423 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 NT5DC4Q86YG4 428 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 RHOT1Q8IXI2 618 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 CADM3Q8N126 398 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 ANKRD44Q8N8A2 993 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 FAM216AQ8WUB2 273 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 OSCP1Q8WVF1 389 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 KLHL29Q96CT2 875 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 LGALS12Q96DT0 336 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 TMX3Q96JJ7 454 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 LINC00479Q96M42 142 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 FOXN4Q96NZ1 517 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 ZNF300Q96RE9 604 aaPredicted RBP0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 TTYH3Q9C0H2 523 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 OSBPL2Q9H1P3 480 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 BRD9Q9H8M2 597 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 EVA1AQ9H8M9 152 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 IFT122Q9HBG6 1241 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 SLAMF7Q9NQ25 335 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 SNX15Q9NRS6 342 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 ZFP57Q9NU63 452 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 OGFRQ9NZT2 677 aa0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 NDRG4Q9ULP0 352 aaKnown RBP0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 WBP11Q9Y2W2 641 aaKnown RBP0.19□□□□□ -2.38
RNU6-340P-201ENST00000364005 ZNF335Q9H4Z2 1342 aaPredicted RBP0.18□□□□□ -2.38
RNU6-340P-201ENST00000364005 NDUFAF8A1L188 74 aa0.18□□□□□ -2.38
RNU6-340P-201ENST00000364005 MAGEA13PA6NCF6 341 aa0.18□□□□□ -2.38
RNU6-340P-201ENST00000364005 C17orf51A8MQB3 221 aa0.18□□□□□ -2.38
RNU6-340P-201ENST00000364005 IFNL4K9M1U5 179 aa0.18□□□□□ -2.38
RNU6-340P-201ENST00000364005 PSMD9O00233 223 aa0.18□□□□□ -2.38
RNU6-340P-201ENST00000364005 FYB1O15117 783 aa0.18□□□□□ -2.38
RNU6-340P-201ENST00000364005 PDPK1O15530 556 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms