RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 SMIM18P0DKX4 95 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 AQP4P55087 323 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 INHBCP55103 352 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 PLCB3Q01970 1234 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 IRF5Q13568 498 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 HSDL1Q3SXM5 330 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 C17orf99Q6UX52 265 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 C15orf39Q6ZRI6 1047 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 SPATA31D4Q6ZUB0 917 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 SLC26A11Q86WA9 606 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 TMEM126BQ8IUX1 230 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 NIPA2Q8N8Q9 360 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 SPATA33Q96N06 139 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 ACAP3Q96P50 834 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 FRMD8Q9BZ67 464 aaPredicted RBP19.71■□□□□ 0.75
CMTM3-201ENST00000361909 KATNBL1Q9H079 304 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 DHX33Q9H6R0 707 aaKnown RBP19.71■□□□□ 0.75
CMTM3-201ENST00000361909 GPRC5CQ9NQ84 441 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 HSFX1Q9UBD0 423 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 TMEM191CA6NGB0 347 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 HNRNPRO43390 633 aaKnown RBP19.71■□□□□ 0.75
CMTM3-201ENST00000361909 CALB1P05937 261 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 TMEM191BP0C7N4 346 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 PEX3P56589 373 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 FAAP100Q0VG06 881 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 LAMC2Q13753 1193 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 PIGHQ14442 188 aaPredicted RBP19.71■□□□□ 0.75
CMTM3-201ENST00000361909 TARBP2Q15633 366 aaKnown RBP19.71■□□□□ 0.75
CMTM3-201ENST00000361909 ADRM1Q16186 407 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 ANKRD22Q5VYY1 191 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 LLGL2Q6P1M3 1020 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 PGM2L1Q6PCE3 622 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 C1orf228Q6PIY5 440 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 CCDC33Q8N5R6 958 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 KCNN1Q92952 543 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 EMID1Q96A84 441 aaPredicted RBP19.71■□□□□ 0.75
CMTM3-201ENST00000361909 NMD3Q96D46 503 aaKnown RBP19.71■□□□□ 0.75
CMTM3-201ENST00000361909 XPNPEP1Q9NQW7 623 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 PDGFCQ9NRA1 345 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 MAD1L1Q9Y6D9 718 aa19.71■□□□□ 0.75
CMTM3-201ENST00000361909 SDR42E2A6NKP2 422 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 TTLL13PA6NNM8 815 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 SNAI1O95863 264 aaPredicted RBP19.7■□□□□ 0.74
CMTM3-201ENST00000361909 MYL4P12829 197 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 TM4SF4P48230 202 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 AQP5P55064 265 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 BBS9Q3SYG4 887 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 MTERF2Q49AM1 385 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 HSF5Q4G112 596 aaPredicted RBP19.7■□□□□ 0.74
CMTM3-201ENST00000361909 MORN1Q5T089 497 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 EXOC8Q8IYI6 725 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 GSTCDQ8NEC7 633 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 ACTRT2Q8TDY3 377 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 DDI1Q8WTU0 396 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 ZFYVE28Q9HCC9 887 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.7■□□□□ 0.74
CMTM3-201ENST00000361909 TCRBV9S1A1TA0A576 114 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 PRR5-ARHGAP8B1AHC4 643 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 H0YCG3 227 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 VILLO15195 856 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 SLC16A4O15374 487 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 CLPTM1O96005 669 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 SNRPAP09012 282 aaKnown RBP19.7■□□□□ 0.74
CMTM3-201ENST00000361909 ACAT1P24752 427 aaKnown RBP19.7■□□□□ 0.74
CMTM3-201ENST00000361909 NPTX2P47972 431 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 ARHGAP8P85298 464 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 DLG1Q12959 904 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 GPD1LQ8N335 351 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 CATSPER1Q8NEC5 780 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 RSAD2Q8WXG1 361 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 TINF2Q9BSI4 451 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 ABHD16BQ9H3Z7 469 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 TOPORSQ9NS56 1045 aaPredicted RBP19.7■□□□□ 0.74
CMTM3-201ENST00000361909 KLHL11Q9NVR0 708 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 CLIC5Q9NZA1 410 aa19.7■□□□□ 0.74
CMTM3-201ENST00000361909 C6orf203Q9P0P8 240 aaPredicted RBP19.7■□□□□ 0.74
CMTM3-201ENST00000361909 XPO7Q9UIA9 1087 aaKnown RBP19.7■□□□□ 0.74
CMTM3-201ENST00000361909 G3BP2Q9UN86 482 aaKnown RBP19.7■□□□□ 0.74
CMTM3-201ENST00000361909 SF3B1O75533 1304 aaKnown RBP eCLIP19.69■□□□□ 0.74
CMTM3-201ENST00000361909 ARHGAP42A6NI28 874 aa19.69■□□□□ 0.74
CMTM3-201ENST00000361909 TMEM88BA6NKF7 163 aa19.69■□□□□ 0.74
CMTM3-201ENST00000361909 TPP2P29144 1249 aaPredicted RBP19.69■□□□□ 0.74
CMTM3-201ENST00000361909 COPAP53621 1224 aa19.69■□□□□ 0.74
CMTM3-201ENST00000361909 PDE1BQ01064 536 aa19.69■□□□□ 0.74
CMTM3-201ENST00000361909 CCNIQ14094 377 aa19.69■□□□□ 0.74
CMTM3-201ENST00000361909 EMC2Q15006 297 aa19.69■□□□□ 0.74
CMTM3-201ENST00000361909 OGFRL1Q5TC84 451 aaPredicted RBP19.69■□□□□ 0.74
CMTM3-201ENST00000361909 AHI1Q8N157 1196 aa19.69■□□□□ 0.74
CMTM3-201ENST00000361909 TMEM161BQ8NDZ6 487 aa19.69■□□□□ 0.74
CMTM3-201ENST00000361909 DIS3LQ8TF46 1054 aaKnown RBP19.69■□□□□ 0.74
CMTM3-201ENST00000361909 SLC7A3Q8WY07 619 aa19.69■□□□□ 0.74
CMTM3-201ENST00000361909 RBM38Q9H0Z9 239 aaKnown RBP19.69■□□□□ 0.74
CMTM3-201ENST00000361909 SMARCAD1Q9H4L7 1026 aa19.69■□□□□ 0.74
CMTM3-201ENST00000361909 RAB26Q9ULW5 256 aa19.69■□□□□ 0.74
CMTM3-201ENST00000361909 PADI4Q9UM07 663 aa19.69■□□□□ 0.74
CMTM3-201ENST00000361909 FAM189A1O60320 539 aa19.68■□□□□ 0.74
CMTM3-201ENST00000361909 HOXC6P09630 235 aa19.68■□□□□ 0.74
CMTM3-201ENST00000361909 GARTP22102 1010 aa19.68■□□□□ 0.74
CMTM3-201ENST00000361909 PEX2P28328 305 aa19.68■□□□□ 0.74
CMTM3-201ENST00000361909 GNA15P30679 374 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms