RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 PPP1R36Q96LQ0 422 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 PHACTR1Q9C0D0 580 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 PICK1Q9NRD5 415 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 MTO1Q9Y2Z2 717 aaKnown RBP10.97□□□□□ -0.65
SMC3-201ENST00000361804 PLLPQ9Y342 182 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 ZNF236Q9UL36 1845 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 PPP1R12AO14974 1030 aaPredicted RBP10.97□□□□□ -0.65
SMC3-201ENST00000361804 ADCY6O43306 1168 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 STK10O94804 968 aaKnown RBP10.97□□□□□ -0.65
SMC3-201ENST00000361804 GPD2P43304 727 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 PPM1JQ5JR12 505 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 ADGRF2Q8IZF7 708 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 NDRG1Q92597 394 aaKnown RBP10.97□□□□□ -0.65
SMC3-201ENST00000361804 TSC22D3Q99576 134 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 OXCT2Q9BYC2 517 aaPredicted RBP10.97□□□□□ -0.65
SMC3-201ENST00000361804 SLC15A5A6NIM6 579 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 IRF6O14896 467 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 TNNC2P02585 160 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 POLR2BP30876 1174 aaKnown RBP10.97□□□□□ -0.65
SMC3-201ENST00000361804 ARRB2P32121 409 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 CACNA2D1P54289 1103 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 ATF7IP2Q5U623 682 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 RAPH1Q70E73 1250 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 ULK2Q8IYT8 1036 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 CDT1Q9H211 546 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 SSU72Q9NP77 194 aaKnown RBP10.97□□□□□ -0.65
SMC3-201ENST00000361804 ETNK2Q9NVF9 386 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 PSAT1Q9Y617 370 aa10.97□□□□□ -0.65
SMC3-201ENST00000361804 LOC100653049A0A140TA62 436 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 CAPN14A8MX76 684 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 KRT34O76011 436 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 ZBED1O96006 694 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 ETS2P15036 469 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 BAG6P46379 1132 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 PDE1BQ01064 536 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 TAZQ16635 292 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 CASC4Q6P4E1 433 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 PYROXD2Q8N2H3 581 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 KATNBL1Q9H079 304 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 SCN4AP35499 1836 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 PPEF2O14830 753 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 MAFO75444 373 aaPredicted RBP10.96□□□□□ -0.65
SMC3-201ENST00000361804 DDNO94850 711 aaPredicted RBP10.96□□□□□ -0.65
SMC3-201ENST00000361804 OSBPP22059 807 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 NDST1P52848 882 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 TEX44Q53QW1 395 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 TTC39BQ5VTQ0 682 aaPredicted RBP10.96□□□□□ -0.65
SMC3-201ENST00000361804 C1orf146Q5VVC0 180 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 LPCAT4Q643R3 524 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 RNF111Q6ZNA4 994 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 ZNF534Q76KX8 674 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 CHSY1Q86X52 802 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 NCAPG2Q86XI2 1143 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.96□□□□□ -0.65
SMC3-201ENST00000361804 TTC13Q8NBP0 860 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 ANKRD36BP1Q96IX9 119 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 RNF157Q96PX1 679 aa10.96□□□□□ -0.65
SMC3-201ENST00000361804 NIFKQ9BYG3 293 aaKnown RBP10.96□□□□□ -0.65
SMC3-201ENST00000361804 I3L4J1 428 aa10.96□□□□□ -0.66
SMC3-201ENST00000361804 PRPSAP2O60256 369 aa10.96□□□□□ -0.66
SMC3-201ENST00000361804 BCAR1P56945 870 aa10.96□□□□□ -0.66
SMC3-201ENST00000361804 OCRLQ01968 901 aa10.96□□□□□ -0.66
SMC3-201ENST00000361804 CCDC14Q49A88 953 aa10.96□□□□□ -0.66
SMC3-201ENST00000361804 PMF1Q6P1K2 205 aa10.96□□□□□ -0.66
SMC3-201ENST00000361804 TP53INP2Q8IXH6 220 aa10.96□□□□□ -0.66
SMC3-201ENST00000361804 FAM172AQ8WUF8 416 aa10.96□□□□□ -0.66
SMC3-201ENST00000361804 TUBGCP5Q96RT8 1024 aa10.96□□□□□ -0.66
SMC3-201ENST00000361804 ZNF518BQ9C0D4 1074 aa10.96□□□□□ -0.66
SMC3-201ENST00000361804 TMEM134Q9H6X4 195 aa10.96□□□□□ -0.66
SMC3-201ENST00000361804 PTPRHQ9HD43 1115 aa10.96□□□□□ -0.66
SMC3-201ENST00000361804 MAN1C1Q9NR34 630 aa10.96□□□□□ -0.66
SMC3-201ENST00000361804 TSPAN16Q9UKR8 245 aa10.96□□□□□ -0.66
SMC3-201ENST00000361804 SYNJ2BP-COX16A0A087WUM0 186 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 IGKV6-21A0A0C4DH24 114 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 ARHGAP42A6NI28 874 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 SNRPAP09012 282 aaKnown RBP10.95□□□□□ -0.66
SMC3-201ENST00000361804 MRPS35P82673 323 aaKnown RBP10.95□□□□□ -0.66
SMC3-201ENST00000361804 SCUBE1Q8IWY4 988 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 SMC1BQ8NDV3 1235 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 ZNF398Q8TD17 642 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 TMEM176AQ96HP8 235 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 CDHR1Q96JP9 859 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 SNRNP25Q9BV90 132 aaKnown RBP10.95□□□□□ -0.66
SMC3-201ENST00000361804 SPATS2LQ9NUQ6 558 aaKnown RBP10.95□□□□□ -0.66
SMC3-201ENST00000361804 PNPOQ9NVS9 261 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 COX16Q9P0S2 106 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 RBPJLQ9UBG7 517 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 MRPL42Q9Y6G3 142 aaKnown RBP10.95□□□□□ -0.66
SMC3-201ENST00000361804 WDR27A2RRH5 827 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 GABBR2O75899 941 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 ANPEPP15144 967 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 GPD1P21695 349 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 PROZP22891 400 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 MSX2P35548 267 aaPredicted RBP10.95□□□□□ -0.66
SMC3-201ENST00000361804 SESN2P58004 480 aaPredicted RBP10.95□□□□□ -0.66
SMC3-201ENST00000361804 TAP1Q03518 808 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 FAM219BQ5XKK7 198 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 ALKBH8Q96BT7 664 aaKnown RBP10.95□□□□□ -0.66
SMC3-201ENST00000361804 RSAD1Q9HA92 442 aa10.95□□□□□ -0.66
SMC3-201ENST00000361804 PAPOLBQ9NRJ5 636 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms