RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 MLH1P40692 756 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 GTF2A2P52657 109 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 C16orf46Q6P387 395 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 RNF157Q96PX1 679 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 BTBD10Q9BSF8 475 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 NOCTQ9UK39 431 aaKnown RBP16.82■□□□□ 0.28
SCAF1-201ENST00000360565 STARD13Q9Y3M8 1113 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 ARFGEF2Q9Y6D5 1785 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 THPOP40225 353 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 GEMP55040 296 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 CAPRIN1Q14444 709 aaKnown RBP16.82■□□□□ 0.28
SCAF1-201ENST00000360565 C10orf120Q5SQS8 335 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 SLC30A9Q6PML9 568 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 ZNF572Q7Z3I7 529 aaPredicted RBP16.82■□□□□ 0.28
SCAF1-201ENST00000360565 TRABD2AQ86V40 505 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 CPNE8Q86YQ8 564 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 TMPRSS6Q8IU80 811 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 ZDHHC17Q8IUH5 632 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 AGAP11Q8TF27 550 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 SYT15Q9BQS2 421 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 C15orf41Q9Y2V0 281 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 BAZ2AQ9UIF9 1905 aaKnown RBP16.82■□□□□ 0.28
SCAF1-201ENST00000360565 CASTOR2A6NHX0 329 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 FOXO6A8MYZ6 492 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 UNC5CO95185 931 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 MAPRE1Q15691 268 aaKnown RBP16.82■□□□□ 0.28
SCAF1-201ENST00000360565 PDK4Q16654 411 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 PTPN20Q4JDL3 420 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 SEL1L3Q68CR1 1132 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 PLEKHA7Q6IQ23 1121 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 POLNQ7Z5Q5 900 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 CLEC4DQ8WXI8 215 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 RPRD1AQ96P16 312 aaPredicted RBP16.82■□□□□ 0.28
SCAF1-201ENST00000360565 PPP1R2P1Q96PQ5 205 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 SNRNP25Q9BV90 132 aaKnown RBP16.82■□□□□ 0.28
SCAF1-201ENST00000360565 ETNK2Q9NVF9 386 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 FAM8A1Q9UBU6 413 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 F8W8V4 182 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 ALOX15BO15296 676 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 FBXO21O94952 628 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 CELF2O95319 508 aaKnown RBP16.82■□□□□ 0.28
SCAF1-201ENST00000360565 KRT16P08779 473 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 THRAP10827 490 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 CHRNB2P17787 502 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 NR2C2P49116 596 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 CRADDP78560 199 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 POU6F1Q14863 301 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 CRYMQ14894 314 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 HSDL1Q3SXM5 330 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 C9orf131Q5VYM1 1079 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 FAM183BPQ6ZVS7 135 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 UNC45BQ8IWX7 931 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 BLOC1S5Q8TDH9 187 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 FAM136AQ96C01 138 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 THAP1Q9NVV9 213 aa16.82■□□□□ 0.28
SCAF1-201ENST00000360565 A0A1W2PPM1 405 aa16.81■□□□□ 0.28
SCAF1-201ENST00000360565 ALADP13716 330 aa16.81■□□□□ 0.28
SCAF1-201ENST00000360565 ACCSLQ4AC99 568 aa16.81■□□□□ 0.28
SCAF1-201ENST00000360565 SLC45A4Q5BKX6 768 aa16.81■□□□□ 0.28
SCAF1-201ENST00000360565 SNX30Q5VWJ9 437 aa16.81■□□□□ 0.28
SCAF1-201ENST00000360565 C12orf29Q8N999 325 aa16.81■□□□□ 0.28
SCAF1-201ENST00000360565 STKLD1Q8NE28 680 aa16.81■□□□□ 0.28
SCAF1-201ENST00000360565 TRUB2O95900 331 aaKnown RBP16.81■□□□□ 0.28
SCAF1-201ENST00000360565 CXorf38Q8TB03 319 aa16.81■□□□□ 0.28
SCAF1-201ENST00000360565 APBB2Q92870 758 aa16.81■□□□□ 0.28
SCAF1-201ENST00000360565 GCNAQ96QF7 691 aa16.81■□□□□ 0.28
SCAF1-201ENST00000360565 ACSS3Q9H6R3 686 aa16.81■□□□□ 0.28
SCAF1-201ENST00000360565 C4BPAP04003 597 aaKnown RBP16.81■□□□□ 0.28
SCAF1-201ENST00000360565 SERPINE1P05121 402 aa16.81■□□□□ 0.28
SCAF1-201ENST00000360565 ADSSP30520 456 aa16.81■□□□□ 0.28
SCAF1-201ENST00000360565 NBPF20Q3BBV1 942 aa16.81■□□□□ 0.28
SCAF1-201ENST00000360565 NT5DC4Q86YG4 428 aa16.81■□□□□ 0.28
SCAF1-201ENST00000360565 LRRC4CQ9HCJ2 640 aa16.81■□□□□ 0.28
SCAF1-201ENST00000360565 SLC30A1Q9Y6M5 507 aa16.81■□□□□ 0.28
SCAF1-201ENST00000360565 MYH10P35580 1976 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 GOLGA8TH3BQL2 631 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 EPHX2P34913 555 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 SLC1A6P48664 564 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 CDK16Q00536 496 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 WASHC2DQ5SRD0 308 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 AGAP9Q5VTM2 703 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 LRRC39Q96DD0 335 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 CDCA5Q96FF9 252 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 VTA1Q9NP79 307 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 CPA4Q9UI42 421 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 MRPL42Q9Y6G3 142 aaKnown RBP16.8■□□□□ 0.28
SCAF1-201ENST00000360565 SUPT3HB4E1H0 165 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 SUPT3HO75486 399 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 EEF1DP29692 281 aaKnown RBP16.8■□□□□ 0.28
SCAF1-201ENST00000360565 PTPN7P35236 360 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 ABCG1P45844 678 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 LHX1P48742 406 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 HIRAP54198 1017 aaPredicted RBP16.8■□□□□ 0.28
SCAF1-201ENST00000360565 TWF1Q12792 350 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 INPP5AQ14642 412 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 VEPH1Q14D04 833 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 TRMT5Q32P41 509 aaKnown RBP16.8■□□□□ 0.28
SCAF1-201ENST00000360565 ZC3H12AQ5D1E8 599 aaKnown RBP16.8■□□□□ 0.28
SCAF1-201ENST00000360565 DEFB107AQ8IZN7 70 aa16.8■□□□□ 0.28
SCAF1-201ENST00000360565 FICDQ9BVA6 458 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms