RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 PKN2Q16513 984 aaKnown RBP12.44□□□□□ -0.42
SYN3-202ENST00000358763 P3H1Q32P28 736 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 CFAP58Q5T655 872 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 CCDC89Q8N998 374 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 TTPALQ9BTX7 342 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 CRISPLD1Q9H336 500 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.44□□□□□ -0.422e-7■■■■■ 31
SYN3-202ENST00000358763 CWC15Q9P013 229 aaKnown RBP12.44□□□□□ -0.42
SYN3-202ENST00000358763 NUDT5Q9UKK9 219 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 MYO16Q9Y6X6 1858 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 OR6C75A6NL08 312 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 C2CD2LO14523 706 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 ELAVL2Q12926 359 aaKnown RBP12.44□□□□□ -0.42
SYN3-202ENST00000358763 GPS2Q13227 327 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 IZUMO3Q5VZ72 239 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 TAC4Q86UU9 113 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 UNC45BQ8IWX7 931 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 PIK3R5Q8WYR1 880 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 IRGQQ8WZA9 623 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 LRRC45Q96CN5 670 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 PWWP2AQ96N64 755 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 CSPG4P5Q96PW8 444 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 SEPT5Q99719 369 aaPredicted RBP12.44□□□□□ -0.42
SYN3-202ENST00000358763 TMEM106CQ9BVX2 250 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 VN1R3Q9BXE9 311 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 WDR6Q9NNW5 1121 aaKnown RBP12.44□□□□□ -0.42
SYN3-202ENST00000358763 WHRNQ9P202 907 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 MTRF1LQ9UGC7 380 aaKnown RBP12.44□□□□□ -0.42
SYN3-202ENST00000358763 DRG1Q9Y295 367 aaKnown RBP12.44□□□□□ -0.42
SYN3-202ENST00000358763 ZNF638Q14966 1978 aaKnown RBP12.44□□□□□ -0.42
SYN3-202ENST00000358763 I6L893 689 aaPredicted RBP12.44□□□□□ -0.42
SYN3-202ENST00000358763 CREB3O43889 395 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 AMPD1P23109 780 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 RFC2P35250 354 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 YWHAGP61981 247 aaKnown RBP eCLIP12.44□□□□□ -0.42
SYN3-202ENST00000358763 USP46P62068 366 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 GPS1Q13098 491 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 NOMO1Q15155 1222 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 RNF19BQ6ZMZ0 732 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 NETO2Q8NC67 525 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 OR2W6PQ8NHA6 318 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 FAM71BQ8TC56 605 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 TOP1MTQ969P6 601 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 FAF2Q96CS3 445 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 FUBP3Q96I24 572 aaKnown RBP eCLIP12.44□□□□□ -0.42
SYN3-202ENST00000358763 RUFY1Q96T51 708 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 ETNK2Q9NVF9 386 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 CDY1Q9Y6F8 540 aa12.44□□□□□ -0.42
SYN3-202ENST00000358763 MTMR11A4FU01 709 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 H7C0C1 242 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 ADAM12O43184 909 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 GBP1P32455 592 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 CHKAP35790 457 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 ATP5OP48047 213 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 GBE1Q04446 702 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 MGAT5BQ3V5L5 792 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 HSP90B2PQ58FF3 399 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 UBAP2Q5T6F2 1119 aaKnown RBP12.43□□□□□ -0.42
SYN3-202ENST00000358763 SLC9A4Q6AI14 798 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 OTOP2Q7RTS6 562 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 FAM71DQ8N9W8 422 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 DQX1Q8TE96 717 aaKnown RBP12.43□□□□□ -0.42
SYN3-202ENST00000358763 RSAD2Q8WXG1 361 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 NMUR1Q9HB89 426 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 ANAPC5Q9UJX4 755 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 PLAAQ9Y263 795 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 LTBP2Q14767 1821 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 ABHD14A-ACY1A0A1B0GW23 586 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 VNN2O95498 520 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 SYF2O95926 243 aaKnown RBP12.43□□□□□ -0.42
SYN3-202ENST00000358763 ARL4AP40617 200 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 WDR5P61964 334 aaKnown RBP12.43□□□□□ -0.42
SYN3-202ENST00000358763 ROR1Q01973 937 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 EFHC2Q5JST6 749 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 DARS2Q6PI48 645 aaKnown RBP12.43□□□□□ -0.42
SYN3-202ENST00000358763 VSTM1Q6UX27 236 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 FAM43BQ6ZT52 329 aaPredicted RBP12.43□□□□□ -0.42
SYN3-202ENST00000358763 SNX10Q9Y5X0 201 aa12.43□□□□□ -0.42
SYN3-202ENST00000358763 A0A1W2PQH9 124 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 FAM72CH0Y354 149 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 ITIH2P19823 946 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 ADRA1BP35368 520 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 CTCFP49711 727 aaPredicted RBP12.42□□□□□ -0.42
SYN3-202ENST00000358763 FAM72AQ5TYM5 149 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 BTBD8Q5XKL5 378 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 FAM72DQ6L9T8 149 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 KCNT2Q6UVM3 1135 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 ANKS3Q6ZW76 656 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 SCD5Q86SK9 330 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 FAM72BQ86X60 149 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 RNF139Q8WU17 664 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 IGSF21Q96ID5 467 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 TRIM66O15016 1216 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 KIAA0355O15063 1070 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 MSI1O43347 362 aaKnown RBP12.42□□□□□ -0.42
SYN3-202ENST00000358763 PPFIA2O75334 1257 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 TGM2P21980 687 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 RHBDF2Q6PJF5 856 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 IQCKQ8N0W5 287 aa12.42□□□□□ -0.42
SYN3-202ENST00000358763 NUP93Q8N1F7 819 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms