RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 ASB16Q96NS5 453 aa15.9■□□□□ 0.14
TPM1-206ENST00000358278 DDX23Q9BUQ8 820 aaKnown RBP15.9■□□□□ 0.14
TPM1-206ENST00000358278 SMG9Q9H0W8 520 aaKnown RBP15.9■□□□□ 0.14
TPM1-206ENST00000358278 DDIT4Q9NX09 232 aa15.9■□□□□ 0.14
TPM1-206ENST00000358278 CPQQ9Y646 472 aa15.9■□□□□ 0.14
TPM1-206ENST00000358278 KIF26AQ9ULI4 1882 aaPredicted RBP15.9■□□□□ 0.14
TPM1-206ENST00000358278 SLC12A8A0AV02 714 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 RCCD1A6NED2 376 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 TMEM191CA6NGB0 347 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 DPYSL4O14531 572 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 HMBSP08397 361 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 IRF1P10914 325 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 LAMP2P13473 410 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 IL9P15248 144 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 PSMA2P25787 234 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 GBP1P32455 592 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 NOP2P46087 812 aaKnown RBP15.89■□□□□ 0.13
TPM1-206ENST00000358278 ZNF143P52747 638 aaPredicted RBP15.89■□□□□ 0.13
TPM1-206ENST00000358278 PITX1P78337 314 aaPredicted RBP15.89■□□□□ 0.13
TPM1-206ENST00000358278 KIF5AQ12840 1032 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 NME3Q13232 169 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 FAM78AQ5JUQ0 283 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 POTEHQ6S545 545 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 RPGRIP1Q96KN7 1286 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 TBCBQ99426 244 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 NPY6RQ99463 290 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 TRIM7Q9C029 511 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 OSGEPQ9NPF4 335 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 TDP1Q9NUW8 608 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 ARHGAP26Q9UNA1 814 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 MYOFQ9NZM1 2061 aa15.89■□□□□ 0.13
TPM1-206ENST00000358278 MYO1FO00160 1098 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 PRAMEF12O95522 483 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 PTPN9P43378 593 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 KCNQ1P51787 676 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 KPNA1P52294 538 aaPredicted RBP15.88■□□□□ 0.13
TPM1-206ENST00000358278 COG7P83436 770 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 C15orf59Q2T9L4 293 aaPredicted RBP15.88■□□□□ 0.13
TPM1-206ENST00000358278 CCDC14Q49A88 953 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 SND1Q7KZF4 910 aaKnown RBP eCLIP15.88■□□□□ 0.13
TPM1-206ENST00000358278 DDX42Q86XP3 938 aaKnown RBP eCLIP15.88■□□□□ 0.13
TPM1-206ENST00000358278 FNIP1Q8TF40 1166 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 USP13Q92995 863 aaPredicted RBP15.88■□□□□ 0.13
TPM1-206ENST00000358278 CNPY3Q9BT09 278 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 TSGA10Q9BZW7 698 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 LACRTQ9GZZ8 138 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 KIF9Q9HAQ2 790 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 IP6K2Q9UHH9 426 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 CCL26Q9Y258 94 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 PPP2R2CQ9Y2T4 447 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 HBS1LQ9Y450 684 aaKnown RBP15.88■□□□□ 0.13
TPM1-206ENST00000358278 VCANP13611 3396 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 A0A0A6YYK5 440 aaPredicted RBP15.88■□□□□ 0.13
TPM1-206ENST00000358278 C2CD4DB7Z1M9 353 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 PJA2O43164 708 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 IRAK2O43187 625 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 CCP110O43303 1012 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 TFE3P19532 575 aaPredicted RBP15.88■□□□□ 0.13
TPM1-206ENST00000358278 WEE1P30291 646 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 NAP1L1P55209 391 aaKnown RBP15.88■□□□□ 0.13
TPM1-206ENST00000358278 OGDHQ02218 1023 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 DEUP1Q05D60 604 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 NNTQ13423 1086 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 FAM172AQ8WUF8 416 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 RNF34Q969K3 372 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 NT5C3BQ969T7 300 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 BTBD6Q96KE9 485 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 ZFRQ96KR1 1074 aaKnown RBP15.88■□□□□ 0.13
TPM1-206ENST00000358278 KLF16Q9BXK1 252 aaPredicted RBP15.88■□□□□ 0.13
TPM1-206ENST00000358278 GKN1Q9NS71 199 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 EPS15L1Q9UBC2 864 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 TLR6Q9Y2C9 796 aa15.88■□□□□ 0.13
TPM1-206ENST00000358278 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.88■□□□□ 0.13
TPM1-206ENST00000358278 KRT86O43790 486 aa15.87■□□□□ 0.13
TPM1-206ENST00000358278 RNF8O76064 485 aa15.87■□□□□ 0.13
TPM1-206ENST00000358278 MTA2O94776 668 aa15.87■□□□□ 0.13
TPM1-206ENST00000358278 F9P00740 461 aa15.87■□□□□ 0.13
TPM1-206ENST00000358278 IGLV3-25P01717 112 aa15.87■□□□□ 0.13
TPM1-206ENST00000358278 RDXP35241 583 aaKnown RBP15.87■□□□□ 0.13
TPM1-206ENST00000358278 TBX4P57082 545 aa15.87■□□□□ 0.13
TPM1-206ENST00000358278 TRIP4Q15650 581 aaPredicted RBP15.87■□□□□ 0.13
TPM1-206ENST00000358278 OTUD1Q5VV17 481 aaPredicted RBP15.87■□□□□ 0.13
TPM1-206ENST00000358278 MTSS1LQ765P7 747 aa15.87■□□□□ 0.13
TPM1-206ENST00000358278 STRADAQ7RTN6 431 aa15.87■□□□□ 0.13
TPM1-206ENST00000358278 CELF5Q8N6W0 485 aaKnown RBP15.87■□□□□ 0.13
TPM1-206ENST00000358278 SH3RF2Q8TEC5 729 aa15.87■□□□□ 0.13
TPM1-206ENST00000358278 PLD4Q96BZ4 506 aa15.87■□□□□ 0.13
TPM1-206ENST00000358278 TRIM44Q96DX7 344 aaPredicted RBP15.87■□□□□ 0.13
TPM1-206ENST00000358278 PGAP3Q96FM1 320 aaPredicted RBP15.87■□□□□ 0.13
TPM1-206ENST00000358278 ADAM33Q9BZ11 813 aa15.87■□□□□ 0.13
TPM1-206ENST00000358278 ZFP14Q9HCL3 533 aa15.87■□□□□ 0.13
TPM1-206ENST00000358278 LCMT1Q9UIC8 334 aa15.87■□□□□ 0.13
TPM1-206ENST00000358278 PAXBP1Q9Y5B6 917 aa15.87■□□□□ 0.13
TPM1-206ENST00000358278 DUSP10Q9Y6W6 482 aa15.87■□□□□ 0.13
TPM1-206ENST00000358278 A0A0U1RQJ8 604 aa15.86■□□□□ 0.13
TPM1-206ENST00000358278 MACROD2A1Z1Q3 448 aa15.86■□□□□ 0.13
TPM1-206ENST00000358278 BTNL10A8MVZ5 291 aa15.86■□□□□ 0.13
TPM1-206ENST00000358278 LEFTY2O00292 366 aa15.86■□□□□ 0.13
TPM1-206ENST00000358278 VIPR2P41587 438 aa15.86■□□□□ 0.13
TPM1-206ENST00000358278 ZNF252P-AS1Q0IIN9 211 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms