RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 SMOC2Q9H3U7 446 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 ZKSCAN5Q9Y2L8 839 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 HYOU1Q9Y4L1 999 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 CAPN6Q9Y6Q1 641 aa26.49■■□□□ 1.83
SSBP3-202ENST00000357475 M0QYT0 321 aa26.48■■□□□ 1.83
SSBP3-202ENST00000357475 ZSCAN12O43309 604 aa26.48■■□□□ 1.83
SSBP3-202ENST00000357475 BUB1BO60566 1050 aaPredicted RBP26.48■■□□□ 1.83
SSBP3-202ENST00000357475 HDCP19113 662 aa26.48■■□□□ 1.83
SSBP3-202ENST00000357475 ATP5C1P36542 298 aaKnown RBP26.48■■□□□ 1.83
SSBP3-202ENST00000357475 PTPN9P43378 593 aa26.48■■□□□ 1.83
SSBP3-202ENST00000357475 HADHBP55084 474 aaKnown RBP26.48■■□□□ 1.83
SSBP3-202ENST00000357475 NME3Q13232 169 aa26.48■■□□□ 1.83
SSBP3-202ENST00000357475 BNIPLQ7Z465 357 aa26.48■■□□□ 1.83
SSBP3-202ENST00000357475 ZNF276Q8N554 614 aa26.48■■□□□ 1.83
SSBP3-202ENST00000357475 ST13P5Q8NFI4 369 aaPredicted RBP26.48■■□□□ 1.83
SSBP3-202ENST00000357475 TPCN2Q8NHX9 752 aa26.48■■□□□ 1.83
SSBP3-202ENST00000357475 FNIP1Q8TF40 1166 aa26.48■■□□□ 1.83
SSBP3-202ENST00000357475 FAM172AQ8WUF8 416 aa26.48■■□□□ 1.83
SSBP3-202ENST00000357475 FGF13Q92913 245 aa26.48■■□□□ 1.83
SSBP3-202ENST00000357475 ZFRQ96KR1 1074 aaKnown RBP26.48■■□□□ 1.83
SSBP3-202ENST00000357475 RIPOR3Q96MK2 946 aa26.48■■□□□ 1.83
SSBP3-202ENST00000357475 TRIM62Q9BVG3 475 aa26.48■■□□□ 1.83
SSBP3-202ENST00000357475 TSGA10Q9BZW7 698 aa26.48■■□□□ 1.83
SSBP3-202ENST00000357475 TASP1Q9H6P5 420 aa26.48■■□□□ 1.83
SSBP3-202ENST00000357475 FAM204AQ9H8W3 233 aa26.48■■□□□ 1.83
SSBP3-202ENST00000357475 SMPD4Q9NXE4 827 aa26.48■■□□□ 1.83
SSBP3-202ENST00000357475 MARCH2Q9P0N8 246 aa26.48■■□□□ 1.83
SSBP3-202ENST00000357475 NUP210Q8TEM1 1887 aaPredicted RBP26.48■■□□□ 1.83
SSBP3-202ENST00000357475 MYO1FO00160 1098 aa26.47■■□□□ 1.83
SSBP3-202ENST00000357475 TCF4P15884 667 aa26.47■■□□□ 1.83
SSBP3-202ENST00000357475 NAP1L1P55209 391 aaKnown RBP26.47■■□□□ 1.83
SSBP3-202ENST00000357475 EIF4EBP2Q13542 120 aaPredicted RBP26.47■■□□□ 1.83
SSBP3-202ENST00000357475 ARHGAP29Q52LW3 1261 aa26.47■■□□□ 1.83
SSBP3-202ENST00000357475 ARHGAP15Q53QZ3 475 aa26.47■■□□□ 1.83
SSBP3-202ENST00000357475 TXLNBQ8N3L3 684 aa26.47■■□□□ 1.83
SSBP3-202ENST00000357475 WBP2Q969T9 261 aa26.47■■□□□ 1.83
SSBP3-202ENST00000357475 CNPY3Q9BT09 278 aa26.47■■□□□ 1.83
SSBP3-202ENST00000357475 NACA2Q9H009 215 aa26.47■■□□□ 1.83
SSBP3-202ENST00000357475 SLITRK6Q9H5Y7 841 aa26.47■■□□□ 1.83
SSBP3-202ENST00000357475 GKN1Q9NS71 199 aa26.47■■□□□ 1.83
SSBP3-202ENST00000357475 PIGVQ9NUD9 493 aa26.47■■□□□ 1.83
SSBP3-202ENST00000357475 DDIT4Q9NX09 232 aa26.47■■□□□ 1.83
SSBP3-202ENST00000357475 IP6K2Q9UHH9 426 aa26.47■■□□□ 1.83
SSBP3-202ENST00000357475 DNMT3LQ9UJW3 386 aa26.47■■□□□ 1.83
SSBP3-202ENST00000357475 STAP1Q9ULZ2 295 aa26.47■■□□□ 1.83
SSBP3-202ENST00000357475 TRAV19A0A0A6YYK7 116 aa26.46■■□□□ 1.83
SSBP3-202ENST00000357475 GRID2IPA4D2P6 1211 aa26.46■■□□□ 1.83
SSBP3-202ENST00000357475 KRT86O43790 486 aa26.46■■□□□ 1.83
SSBP3-202ENST00000357475 HMBSP08397 361 aa26.46■■□□□ 1.83
SSBP3-202ENST00000357475 MTHFRP42898 656 aa26.46■■□□□ 1.83
SSBP3-202ENST00000357475 HDAC4P56524 1084 aa26.46■■□□□ 1.83
SSBP3-202ENST00000357475 CENPIQ92674 756 aaPredicted RBP26.46■■□□□ 1.83
SSBP3-202ENST00000357475 MYADMQ96S97 322 aa26.46■■□□□ 1.83
SSBP3-202ENST00000357475 OLA1Q9NTK5 396 aaKnown RBP26.46■■□□□ 1.83
SSBP3-202ENST00000357475 CCL26Q9Y258 94 aa26.46■■□□□ 1.83
SSBP3-202ENST00000357475 USTQ9Y2C2 406 aa26.46■■□□□ 1.83
SSBP3-202ENST00000357475 MBTPS2O43462 519 aa26.45■■□□□ 1.83
SSBP3-202ENST00000357475 PROSCO94903 275 aa26.45■■□□□ 1.83
SSBP3-202ENST00000357475 PRAMEF12O95522 483 aa26.45■■□□□ 1.83
SSBP3-202ENST00000357475 CKMP06732 381 aa26.45■■□□□ 1.83
SSBP3-202ENST00000357475 MBL2P11226 248 aaPredicted RBP26.45■■□□□ 1.83
SSBP3-202ENST00000357475 KLHDC10Q6PID8 442 aa26.45■■□□□ 1.83
SSBP3-202ENST00000357475 CMTM8Q8IZV2 173 aa26.45■■□□□ 1.83
SSBP3-202ENST00000357475 ADAMTS19Q8TE59 1207 aa26.45■■□□□ 1.83
SSBP3-202ENST00000357475 CPQQ9Y646 472 aa26.45■■□□□ 1.83
SSBP3-202ENST00000357475 SLC12A8A0AV02 714 aa26.44■■□□□ 1.82
SSBP3-202ENST00000357475 IRAK2O43187 625 aa26.44■■□□□ 1.82
SSBP3-202ENST00000357475 SP100P23497 879 aaPredicted RBP26.44■■□□□ 1.82
SSBP3-202ENST00000357475 TFF2Q03403 129 aa26.44■■□□□ 1.82
SSBP3-202ENST00000357475 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.44■■□□□ 1.82
SSBP3-202ENST00000357475 RIN3Q8TB24 985 aa26.44■■□□□ 1.82
SSBP3-202ENST00000357475 KLF16Q9BXK1 252 aaPredicted RBP26.44■■□□□ 1.82
SSBP3-202ENST00000357475 ANLNQ9NQW6 1124 aa26.44■■□□□ 1.82
SSBP3-202ENST00000357475 TMPRSS4Q9NRS4 437 aa26.44■■□□□ 1.82
SSBP3-202ENST00000357475 LRCH4O75427 683 aa26.44■■□□□ 1.82
SSBP3-202ENST00000357475 ENDOD1O94919 500 aa26.44■■□□□ 1.82
SSBP3-202ENST00000357475 DDX6P26196 483 aaKnown RBP eCLIP26.44■■□□□ 1.821e-6■■□□□ 12.6
SSBP3-202ENST00000357475 KCNQ1P51787 676 aa26.44■■□□□ 1.82
SSBP3-202ENST00000357475 DEUP1Q05D60 604 aa26.44■■□□□ 1.82
SSBP3-202ENST00000357475 SMAD4Q13485 552 aaKnown RBP26.44■■□□□ 1.82
SSBP3-202ENST00000357475 TADA2BQ86TJ2 420 aa26.44■■□□□ 1.82
SSBP3-202ENST00000357475 NIPA2Q8N8Q9 360 aa26.44■■□□□ 1.82
SSBP3-202ENST00000357475 LRRC57Q8N9N7 239 aa26.44■■□□□ 1.82
SSBP3-202ENST00000357475 ZSCAN18Q8TBC5 510 aaPredicted RBP26.44■■□□□ 1.82
SSBP3-202ENST00000357475 PGAP3Q96FM1 320 aaPredicted RBP26.44■■□□□ 1.82
SSBP3-202ENST00000357475 CDK5RAP1Q96SZ6 601 aaKnown RBP26.44■■□□□ 1.82
SSBP3-202ENST00000357475 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.44■■□□□ 1.821e-7■■■□□ 18
SSBP3-202ENST00000357475 I6L893 689 aaPredicted RBP26.43■■□□□ 1.82
SSBP3-202ENST00000357475 SCAMP3O14828 347 aaKnown RBP26.43■■□□□ 1.82
SSBP3-202ENST00000357475 PALMO75781 387 aa26.43■■□□□ 1.82
SSBP3-202ENST00000357475 IRF1P10914 325 aa26.43■■□□□ 1.82
SSBP3-202ENST00000357475 SLC7A9P82251 487 aa26.43■■□□□ 1.82
SSBP3-202ENST00000357475 PIGHQ14442 188 aaPredicted RBP26.43■■□□□ 1.82
SSBP3-202ENST00000357475 STRADAQ7RTN6 431 aa26.43■■□□□ 1.82
SSBP3-202ENST00000357475 FAM131BQ86XD5 332 aa26.43■■□□□ 1.82
SSBP3-202ENST00000357475 USP13Q92995 863 aaPredicted RBP26.43■■□□□ 1.82
SSBP3-202ENST00000357475 FCRL2Q96LA5 508 aaPredicted RBP26.43■■□□□ 1.82
SSBP3-202ENST00000357475 SERPINB11Q96P15 392 aa26.43■■□□□ 1.82
SSBP3-202ENST00000357475 PEBP4Q96S96 227 aa26.43■■□□□ 1.82
SSBP3-202ENST00000357475 KCND1Q9NSA2 647 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms