RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 MAGEA4P43358 317 aa17.71■□□□□ 0.42
COL27A1-201ENST00000356083 DNAJC3Q13217 504 aa17.71■□□□□ 0.42
COL27A1-201ENST00000356083 EML3Q32P44 896 aa17.71■□□□□ 0.42
COL27A1-201ENST00000356083 KRT73Q86Y46 540 aa17.71■□□□□ 0.42
COL27A1-201ENST00000356083 OR2W6PQ8NHA6 318 aa17.71■□□□□ 0.42
COL27A1-201ENST00000356083 ZNF354BQ96LW1 612 aa17.71■□□□□ 0.42
COL27A1-201ENST00000356083 TIMM13Q9Y5L4 95 aaPredicted RBP17.71■□□□□ 0.42
COL27A1-201ENST00000356083 GRID2IPA4D2P6 1211 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 GTPBP1O00178 669 aaKnown RBP17.7■□□□□ 0.42
COL27A1-201ENST00000356083 TIMM44O43615 452 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 MTA2O94776 668 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 FMO5P49326 533 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 NUP107P57740 925 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 KCNT1Q5JUK3 1230 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 ZNF621Q6ZSS3 439 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 SPATA4Q8NEY3 305 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 MCUBQ9NWR8 336 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 FAM153AQ9UHL3 310 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 ENTPD4Q9Y227 616 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 MRPS7Q9Y2R9 242 aaKnown RBP17.7■□□□□ 0.42
COL27A1-201ENST00000356083 EYA4O95677 639 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 ARHGDIBP52566 201 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 STRA8Q7Z7C7 330 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 PPP1R13LQ8WUF5 828 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 TMEM159Q96B96 161 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 PIGUQ9H490 435 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 VPS4BO75351 444 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 PUDPQ08623 228 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 CHP1Q99653 195 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 AHSPQ9NZD4 102 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 USP18Q9UMW8 372 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 EFR3BQ9Y2G0 817 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 ABCC10Q5T3U5 1492 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 ZNF189O75820 626 aaPredicted RBP17.7■□□□□ 0.42
COL27A1-201ENST00000356083 ADSLP30566 484 aaPredicted RBP17.7■□□□□ 0.42
COL27A1-201ENST00000356083 SLC4A5Q9BY07 1137 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 BTBD3Q9Y2F9 522 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 HBP1O60381 514 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 CRTAMO95727 393 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 GLP2RO95838 553 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 CES5AQ6NT32 575 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 POMZP3Q6PJE2 187 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 MTMR12Q9C0I1 747 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 ZNRF3Q9ULT6 936 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 AAR2Q9Y312 384 aaKnown RBP17.7■□□□□ 0.42
COL27A1-201ENST00000356083 USP15Q9Y4E8 981 aaPredicted RBP17.7■□□□□ 0.42
COL27A1-201ENST00000356083 COPAP53621 1224 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 STILQ15468 1287 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 PMF1Q6P1K2 205 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 ATP6V1C2Q8NEY4 427 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 SLC20A1Q8WUM9 679 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 FAM111AQ96PZ2 611 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 TLR8Q9NR97 1041 aaKnown RBP17.7■□□□□ 0.42
COL27A1-201ENST00000356083 DLGAP2Q9P1A6 1054 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 LRCH1Q9Y2L9 728 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 UNC13AQ9UPW8 1703 aa17.7■□□□□ 0.42
COL27A1-201ENST00000356083 TAF4O00268 1085 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 ADGRF2Q8IZF7 708 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 MYOCQ99972 504 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 PIH1D1Q9NWS0 290 aaKnown RBP17.69■□□□□ 0.42
COL27A1-201ENST00000356083 SUCOQ9UBS9 1254 aaKnown RBP17.69■□□□□ 0.42
COL27A1-201ENST00000356083 WARSP23381 471 aaKnown RBP17.69■□□□□ 0.42
COL27A1-201ENST00000356083 OR1E1P30953 314 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 GALCP54803 685 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 RSAD1Q9HA92 442 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 ABCA10Q8WWZ4 1543 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 TSNQ15631 228 aaKnown RBP17.69■□□□□ 0.42
COL27A1-201ENST00000356083 SLFN11Q7Z7L1 901 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 CLCC1Q96S66 551 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 RRAGCQ9HB90 399 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 TOR4AQ9NXH8 423 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 RPS6KA4O75676 772 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 ALOX12P18054 663 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 HOXA7P31268 230 aaPredicted RBP17.69■□□□□ 0.42
COL27A1-201ENST00000356083 GALNTL5Q7Z4T8 443 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 EDEM1Q92611 657 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 AP4E1Q9UPM8 1137 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 COPZ1P61923 177 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 GNA13Q14344 377 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 ITIH5Q86UX2 942 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 ARID3BQ8IVW6 561 aaPredicted RBP17.69■□□□□ 0.42
COL27A1-201ENST00000356083 ICE1Q9Y2F5 2266 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 ZCCHC18P0CG32 403 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 AKT2P31751 481 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 CSHL1Q14406 222 aa17.69■□□□□ 0.42
COL27A1-201ENST00000356083 FAM120BQ96EK7 910 aaKnown RBP17.69■□□□□ 0.42
COL27A1-201ENST00000356083 TRNT1Q96Q11 434 aaKnown RBP17.69■□□□□ 0.42
COL27A1-201ENST00000356083 PRG2P13727 222 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 MAPK1P28482 360 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 DDHD1Q8NEL9 900 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 FEZF2Q8TBJ5 459 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 MARK1Q9P0L2 795 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 MTO1Q9Y2Z2 717 aaKnown RBP17.68■□□□□ 0.42
COL27A1-201ENST00000356083 FCHO2Q0JRZ9 810 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 RAPSNQ13702 412 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 SPIDRQ14159 915 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 BTG3Q14201 252 aaPredicted RBP17.68■□□□□ 0.42
COL27A1-201ENST00000356083 ACAP2Q15057 778 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 EPHA7Q15375 998 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 KLHL3Q9UH77 587 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms