RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 MTSS1LQ765P7 747 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 NT5DC4Q86YG4 428 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 RIN3Q8TB24 985 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 GPRC5DQ9NZD1 345 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 CTNNAL1Q9UBT7 734 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 RAD54BQ9Y620 910 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 COPG1Q9Y678 874 aaKnown RBP18.53■□□□□ 0.56
COL18A1-202ENST00000355480 CAPN6Q9Y6Q1 641 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 PSMC6P62333 389 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 ZNF571Q7Z3V5 609 aaPredicted RBP18.53■□□□□ 0.56
COL18A1-202ENST00000355480 ATP13A1Q9HD20 1204 aa18.53■□□□□ 0.56
COL18A1-202ENST00000355480 UBTFL6P0CB48 400 aaPredicted RBP18.52■□□□□ 0.56
COL18A1-202ENST00000355480 OR1E1P30953 314 aa18.52■□□□□ 0.56
COL18A1-202ENST00000355480 IRAK1P51617 712 aa18.52■□□□□ 0.56
COL18A1-202ENST00000355480 ALDH5A1P51649 535 aaPredicted RBP18.52■□□□□ 0.56
COL18A1-202ENST00000355480 POU6F1Q14863 301 aa18.52■□□□□ 0.56
COL18A1-202ENST00000355480 SLC26A11Q86WA9 606 aa18.52■□□□□ 0.56
COL18A1-202ENST00000355480 SNTNA6NMZ2 147 aa18.52■□□□□ 0.56
COL18A1-202ENST00000355480 ITGB6P18564 788 aa18.52■□□□□ 0.56
COL18A1-202ENST00000355480 CNTFP26441 200 aa18.52■□□□□ 0.56
COL18A1-202ENST00000355480 TRIP4Q15650 581 aaPredicted RBP18.52■□□□□ 0.56
COL18A1-202ENST00000355480 GFM2Q969S9 779 aaKnown RBP18.52■□□□□ 0.56
COL18A1-202ENST00000355480 CAAP1Q9H8G2 361 aa18.52■□□□□ 0.56
COL18A1-202ENST00000355480 DNAJC16Q9Y2G8 782 aa18.52■□□□□ 0.56
COL18A1-202ENST00000355480 NR5A2O00482 541 aa18.52■□□□□ 0.56
COL18A1-202ENST00000355480 SHMT1P34896 483 aa18.52■□□□□ 0.56
COL18A1-202ENST00000355480 ITGA9Q13797 1035 aa18.52■□□□□ 0.56
COL18A1-202ENST00000355480 NLRP9Q7RTR0 991 aa18.52■□□□□ 0.56
COL18A1-202ENST00000355480 SMARCD1Q96GM5 515 aa18.52■□□□□ 0.56
COL18A1-202ENST00000355480 ACOX2Q99424 681 aa18.52■□□□□ 0.56
COL18A1-202ENST00000355480 BBS2Q9BXC9 721 aa18.52■□□□□ 0.56
COL18A1-202ENST00000355480 GLIS2Q9BZE0 524 aaPredicted RBP18.52■□□□□ 0.56
COL18A1-202ENST00000355480 VTA1Q9NP79 307 aa18.52■□□□□ 0.56
COL18A1-202ENST00000355480 VIL1P09327 827 aaKnown RBP18.52■□□□□ 0.55
COL18A1-202ENST00000355480 TAF2Q6P1X5 1199 aa18.52■□□□□ 0.55
COL18A1-202ENST00000355480 LRRC8DQ7L1W4 858 aa18.52■□□□□ 0.55
COL18A1-202ENST00000355480 SRLQ86TD4 932 aa18.52■□□□□ 0.55
COL18A1-202ENST00000355480 CYP4Z1Q86W10 505 aa18.52■□□□□ 0.55
COL18A1-202ENST00000355480 TRAPPC12Q8WVT3 735 aa18.52■□□□□ 0.55
COL18A1-202ENST00000355480 CNBD2Q96M20 576 aa18.52■□□□□ 0.55
COL18A1-202ENST00000355480 AMHP03971 560 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 MAPK9P45984 424 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 CCNG1P51959 295 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 DEFA1P59665 94 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 DEFA3P59666 94 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 MED8Q96G25 268 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 CEP41Q9BYV8 373 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 ABHD16BQ9H3Z7 469 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 MIEF1Q9NQG6 463 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 PDZK1P1A8MUH7 402 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 ADM5C9JUS6 153 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 HNRNPCP07910 306 aaKnown RBP eCLIP18.51■□□□□ 0.556e-7■□□□□ 8.9
COL18A1-202ENST00000355480 CCNG2Q16589 344 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 P2RX7Q99572 595 aaKnown RBP18.51■□□□□ 0.55
COL18A1-202ENST00000355480 CYP39A1Q9NYL5 469 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 NCKIPSDQ9NZQ3 722 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 PSMD12O00232 456 aaPredicted RBP18.51■□□□□ 0.55
COL18A1-202ENST00000355480 GSTM1P09488 218 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 MYBPC2Q14324 1141 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 SOCS4Q8WXH5 440 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 REREQ9P2R6 1566 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 RARGP13631 454 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 POU1F1P28069 291 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 KRT20P35900 424 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 CYLC2Q14093 348 aaPredicted RBP18.51■□□□□ 0.55
COL18A1-202ENST00000355480 MAGED4Q96JG8 741 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 PPP1R10Q96QC0 940 aaKnown RBP18.51■□□□□ 0.55
COL18A1-202ENST00000355480 CCNT2O60583 730 aaKnown RBP18.51■□□□□ 0.55
COL18A1-202ENST00000355480 ZNF682O95780 498 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 YWHAQP27348 245 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 TUBP50607 506 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 MMRN1Q13201 1228 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 CBWD3Q5JTY5 395 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 CBWD5Q5RIA9 395 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 MAGEB18Q96M61 343 aa18.51■□□□□ 0.55
COL18A1-202ENST00000355480 UNKQ9C0B0 810 aaKnown RBP18.51■□□□□ 0.55
COL18A1-202ENST00000355480 CDC42EP4Q9H3Q1 356 aaKnown RBP18.51■□□□□ 0.55
COL18A1-202ENST00000355480 TPBGLP0DKB5 382 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 CPA3P15088 417 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 C1QBPQ07021 282 aaKnown RBP18.5■□□□□ 0.55
COL18A1-202ENST00000355480 SERAC1Q96JX3 654 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 RBAK-RBAKDNI3L0D1 243 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 O00370 1275 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 MAPTP10636 758 aaKnown RBP18.5■□□□□ 0.55
COL18A1-202ENST00000355480 FIGNQ5HY92 759 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 MRPL9Q9BYD2 267 aaKnown RBP18.5■□□□□ 0.55
COL18A1-202ENST00000355480 RRN3Q9NYV6 651 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 CAMSAP1Q5T5Y3 1602 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 SERPINI2O75830 405 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 IFNA14P01570 189 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 MGAT5Q09328 741 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 ZNF786Q8N393 782 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 ACTL9Q8TC94 416 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 TBC1D23Q9NUY8 699 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 TRPC4Q9UBN4 977 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 A0A0A6YYK5 440 aaPredicted RBP18.5■□□□□ 0.55
COL18A1-202ENST00000355480 TNNI3P19429 210 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 HSPA13P48723 471 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 ALDH9A1P49189 494 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 RARRES1P49788 294 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms