RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 MAPRE3Q9UPY8 281 aa8.25□□□□□ -1.09
SCN8A-201ENST00000354534 ITIH1P19827 911 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 PTGISQ16647 500 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 DENND1BQ6P3S1 775 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 SETD9Q8NE22 299 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 ASB12Q8WXK4 309 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 TDRD1Q9BXT4 1180 aaKnown RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 GPATCH8Q9UKJ3 1502 aaKnown RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 ITIH2P19823 946 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 MAGEA6P43360 314 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 SLC30A5Q8TAD4 765 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 UBA1P22314 1058 aaKnown RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 TUFMP49411 452 aaKnown RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 XIAPP98170 497 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 SLC15A2Q16348 729 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 PCDH19Q8TAB3 1148 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 FAM111AQ96PZ2 611 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 NCKAP5LQ9HCH0 1330 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 FAM172BPA6NC97 362 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 ZSCAN5CA6NGD5 496 aaPredicted RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 TDRD5Q8NAT2 981 aaKnown RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 FAM136AQ96C01 138 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 ZSCAN5AQ9BUG6 496 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 SCUBE2Q9NQ36 999 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 ENOPH1Q9UHY7 261 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 PTPRKQ15262 1439 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 TRIM64BA6NI03 449 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 YY1P25490 414 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 MAPK1P28482 360 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 FAUP35544 74 aaKnown RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 GEMIN4P57678 1058 aaKnown RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 PCNX4Q63HM2 1172 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 ZDHHC13Q8IUH4 622 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 OR6Y1Q8NGX8 325 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 SPATA18Q8TC71 538 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 AKAP1Q92667 903 aaKnown RBP eCLIP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 CCDC177Q9NQR7 707 aaPredicted RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 LIMD1Q9UGP4 676 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 ACSL4O60488 711 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 DBTP11182 482 aaKnown RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 EPC2Q52LR7 807 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 ANKFN1Q8N957 763 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 PRCCQ92733 491 aaPredicted RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 STK33Q9BYT3 514 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 STARD7Q9NQZ5 370 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 CARD8Q9Y2G2 431 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 MYH9P35579 1960 aaKnown RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 CCDC154A6NI56 674 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 SLC33A1O00400 549 aaPredicted RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 CIAO1O76071 339 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 OLR1P78380 273 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 SMU1Q2TAY7 513 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 TTLL9Q3SXZ7 439 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 IQSEC1Q6DN90 963 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 ERBB4Q15303 1308 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 NR3C1P04150 777 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 EIF2AK2P19525 551 aaKnown RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 PTX3P26022 381 aaPredicted RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 GSTT1P30711 240 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 SLC26A3P40879 764 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 MAGEA4P43358 317 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 AGKQ53H12 422 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 DEFB107AQ8IZN7 70 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 HTRA1Q92743 480 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 BHMTQ93088 406 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 TRIT1Q9H3H1 467 aaKnown RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 STN1Q9H668 368 aaKnown RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 CHORDC1Q9UHD1 332 aaPredicted RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 GPN3Q9UHW5 284 aaPredicted RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 NEDD4P46934 1319 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 RGSL1A5PLK6 1076 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 NFKB1P19838 968 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 MSLNQ13421 630 aaPredicted RBP8.24□□□□□ -1.09
SCN8A-201ENST00000354534 AP3S1Q92572 193 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 CCDC126Q96EE4 140 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 FAR2Q96K12 515 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 RNF145Q96MT1 663 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 EYA1Q99502 592 aa8.24□□□□□ -1.09
SCN8A-201ENST00000354534 M0R036 132 aa8.23□□□□□ -1.09
SCN8A-201ENST00000354534 CCR4P51679 360 aa8.23□□□□□ -1.09
SCN8A-201ENST00000354534 EFHC1Q5JVL4 640 aa8.23□□□□□ -1.09
SCN8A-201ENST00000354534 OGFRL1Q5TC84 451 aaPredicted RBP8.23□□□□□ -1.09
SCN8A-201ENST00000354534 TTC27Q6P3X3 843 aa8.23□□□□□ -1.09
SCN8A-201ENST00000354534 EXOC3L1Q86VI1 746 aa8.23□□□□□ -1.09
SCN8A-201ENST00000354534 SSH3Q8TE77 659 aa8.23□□□□□ -1.09
SCN8A-201ENST00000354534 FAM167AQ96KS9 214 aa8.23□□□□□ -1.09
SCN8A-201ENST00000354534 OXCT2Q9BYC2 517 aaPredicted RBP8.23□□□□□ -1.09
SCN8A-201ENST00000354534 VPS33BQ9H267 617 aa8.23□□□□□ -1.09
SCN8A-201ENST00000354534 CRLS1Q9UJA2 301 aa8.23□□□□□ -1.09
SCN8A-201ENST00000354534 MYH11P35749 1972 aa8.23□□□□□ -1.09
SCN8A-201ENST00000354534 CDC25CP30307 473 aa8.23□□□□□ -1.09
SCN8A-201ENST00000354534 PHKA2P46019 1235 aa8.23□□□□□ -1.09
SCN8A-201ENST00000354534 IRAK1P51617 712 aa8.23□□□□□ -1.09
SCN8A-201ENST00000354534 HDDC3Q8N4P3 179 aa8.23□□□□□ -1.09
SCN8A-201ENST00000354534 CIDECQ96AQ7 238 aaPredicted RBP8.23□□□□□ -1.09
SCN8A-201ENST00000354534 RGS17Q9UGC6 210 aaPredicted RBP8.23□□□□□ -1.09
SCN8A-201ENST00000354534 ABCG2Q9UNQ0 655 aa8.23□□□□□ -1.09
SCN8A-201ENST00000354534 LOC110117498-PIK3R3F6TDL0 507 aa8.23□□□□□ -1.09
SCN8A-201ENST00000354534 MAGP20916 626 aa8.23□□□□□ -1.09
SCN8A-201ENST00000354534 PTPN6P29350 595 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms