RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 MAST2Q6P0Q8 1798 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 TCRBV9S1A1TA0A576 114 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 KPNA4O00629 521 aaPredicted RBP13.67□□□□□ -0.22
IFT88-202ENST00000351808 AIM2O14862 343 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 RNASEH2AO75792 299 aaKnown RBP13.67□□□□□ -0.22
IFT88-202ENST00000351808 KRT75O95678 551 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 CETN1Q12798 172 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 TRAF2Q12933 501 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 LRP8Q14114 963 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 FAAH2Q6GMR7 532 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 GALNT18Q6P9A2 607 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 POLNQ7Z5Q5 900 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 CTAGE3PQ8IX95 158 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 TMEM102Q8N9M5 508 aaPredicted RBP13.67□□□□□ -0.22
IFT88-202ENST00000351808 CPA5Q8WXQ8 436 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 PCIF1Q9H4Z3 704 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 RIOX1Q9H6W3 641 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 THAP1Q9NVV9 213 aa13.67□□□□□ -0.22
IFT88-202ENST00000351808 GRIN3BO60391 1043 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 MYO1DO94832 1006 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 PROSCO94903 275 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 TOP3BO95985 862 aaKnown RBP13.66□□□□□ -0.22
IFT88-202ENST00000351808 WEE2P0C1S8 567 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 FGFR3P22607 806 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 PKNOX1P55347 436 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 PRAMEP78395 509 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 ABCB5Q2M3G0 1257 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 PERM1Q5SV97 790 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 MAVSQ7Z434 540 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 PDZD8Q8NEN9 1154 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 HM13Q8TCT9 377 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 OTUD5Q96G74 571 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 CDRT15Q96T59 188 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 PPP1R1BQ9UD71 204 aaPredicted RBP13.66□□□□□ -0.22
IFT88-202ENST00000351808 SLC8A2Q9UPR5 921 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 CPQQ9Y646 472 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 UBR2Q8IWV8 1755 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 PRSS51A0A1B0GVH4 220 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 PSMD11O00231 422 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 BPGMP07738 259 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 LDHCP07864 332 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 ENO2P09104 434 aaPredicted RBP13.66□□□□□ -0.22
IFT88-202ENST00000351808 CHRNB1P11230 501 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 GRM5P41594 1212 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 MXI1P50539 228 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 TSPY1Q01534 308 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 PTP4A2Q12974 167 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 NME3Q13232 169 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 OXA1LQ15070 435 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 LSM12Q3MHD2 195 aaKnown RBP13.66□□□□□ -0.22
IFT88-202ENST00000351808 PARP10Q53GL7 1025 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 C11orf74Q86VG3 221 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 KATNAL2Q8IYT4 538 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 PPM1NQ8N819 430 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 FAM47BQ8NA70 645 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 BHMTQ93088 406 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 FRMD8Q9BZ67 464 aaPredicted RBP13.66□□□□□ -0.22
IFT88-202ENST00000351808 ST14Q9Y5Y6 855 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 TAF1LQ8IZX4 1826 aa13.66□□□□□ -0.22
IFT88-202ENST00000351808 FAM189A1O60320 539 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 CSPG5O95196 566 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 ERBB2P04626 1255 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 EIF2S1P05198 315 aaKnown RBP13.65□□□□□ -0.22
IFT88-202ENST00000351808 MCF2P10911 925 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 ELK3P41970 407 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 IDH3AP50213 366 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 IFITM2Q01629 132 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 SELENBP1Q13228 472 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 PMS2P3Q13401 168 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 BMPR2Q13873 1038 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 IKBKEQ14164 716 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 MFSD7Q6UXD7 560 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 ITIH5Q86UX2 942 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 PPIL6Q8IXY8 311 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 MCOLN2Q8IZK6 566 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 EXD1Q8NHP7 514 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 CAPSLQ8WWF8 208 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 DHX38Q92620 1227 aaKnown RBP13.65□□□□□ -0.22
IFT88-202ENST00000351808 OSBPL11Q9BXB4 747 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 RIC8BQ9NVN3 520 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 IFT52Q9Y366 437 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 TLL2Q9Y6L7 1015 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 A0A087WXM4 84 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 EIF3DO15371 548 aaKnown RBP eCLIP13.65□□□□□ -0.22
IFT88-202ENST00000351808 CFLARO15519 480 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 PSTPIP1O43586 416 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 GMNNO75496 209 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 CAPNS1P04632 268 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 TPTEP56180 551 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 BPHLQ86WA6 291 aaPredicted RBP13.65□□□□□ -0.22
IFT88-202ENST00000351808 ZC3H7AQ8IWR0 971 aaKnown RBP13.65□□□□□ -0.22
IFT88-202ENST00000351808 USP13Q92995 863 aaPredicted RBP13.65□□□□□ -0.22
IFT88-202ENST00000351808 VTI1AQ96AJ9 217 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 ZNF597Q96LX8 424 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 KLHL32Q96NJ5 620 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 PCDH9Q9HC56 1237 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 PNPOQ9NVS9 261 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 TMEM63AO94886 807 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 TCF4P15884 667 aa13.65□□□□□ -0.22
IFT88-202ENST00000351808 NUDT2P50583 147 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms