RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 PLXNB2O15031 1838 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 NUP205Q92621 2012 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 PRRC2BQ5JSZ5 2229 aaKnown RBP14.41□□□□□ -0.1
TRIM4-201ENST00000349062 CCDC195A0A1B0GUA6 201 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 CSPG5O95196 566 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 THP07101 528 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 GNAT1P11488 350 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 BDNFP23560 247 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 CCND3P30281 292 aaPredicted RBP14.41□□□□□ -0.1
TRIM4-201ENST00000349062 CACNA2D1P54289 1103 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 SV2CQ496J9 727 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 ARHGEF18Q6ZSZ5 1173 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 IFNLR1Q8IU57 520 aaPredicted RBP14.41□□□□□ -0.1
TRIM4-201ENST00000349062 ANKRD52Q8NB46 1076 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 TTC17Q96AE7 1141 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 TNIP3Q96KP6 325 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 YIPF3Q9GZM5 350 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 NRP1O14786 923 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 UGT1A9O60656 530 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 ASGR1P07306 291 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 CRYBB1P53674 252 aaPredicted RBP14.41□□□□□ -0.1
TRIM4-201ENST00000349062 SLC10A2Q12908 348 aaPredicted RBP14.41□□□□□ -0.1
TRIM4-201ENST00000349062 KBTBD12Q3ZCT8 623 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 RWDD4Q6NW29 188 aaKnown RBP14.41□□□□□ -0.1
TRIM4-201ENST00000349062 PQLC3Q8N755 202 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 GPR152Q8TDT2 470 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 KHSRPQ92945 711 aaKnown RBP eCLIP14.41□□□□□ -0.1
TRIM4-201ENST00000349062 ROPN1BQ9BZX4 212 aaPredicted RBP14.41□□□□□ -0.1
TRIM4-201ENST00000349062 ROPN1Q9HAT0 212 aaPredicted RBP14.41□□□□□ -0.1
TRIM4-201ENST00000349062 UGT1A7Q9HAW7 530 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 UGT1A10Q9HAW8 530 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 UGT1A8Q9HAW9 530 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 XPNPEP3Q9NQH7 507 aa14.41□□□□□ -0.1
TRIM4-201ENST00000349062 AOC2O75106 756 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 ABCG1P45844 678 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 DEUP1Q05D60 604 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 BOLA3Q53S33 107 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 HEATR6Q6AI08 1181 aaKnown RBP14.4□□□□□ -0.1
TRIM4-201ENST00000349062 GPRIN1Q7Z2K8 1008 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 CCHCR1Q8TD31 782 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 CELF6Q96J87 481 aaKnown RBP14.4□□□□□ -0.1
TRIM4-201ENST00000349062 KCTD15Q96SI1 283 aaPredicted RBP14.4□□□□□ -0.1
TRIM4-201ENST00000349062 APBA2Q99767 749 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 ECT2Q9H8V3 914 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 PLEKHA5Q9HAU0 1116 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 CLUHO75153 1309 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 ATXN2Q99700 1313 aaKnown RBP14.4□□□□□ -0.1
TRIM4-201ENST00000349062 LOC285556D6RIA3 1793 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 INHBAP08476 426 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 IL4RP24394 825 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 MRPS6P82932 125 aaKnown RBP14.4□□□□□ -0.1
TRIM4-201ENST00000349062 WLSQ5T9L3 541 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 KIAA0319Q5VV43 1072 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 PRPF39Q86UA1 669 aaKnown RBP14.4□□□□□ -0.1
TRIM4-201ENST00000349062 ATP11CQ8NB49 1132 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 TMEM209Q96SK2 561 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 ADAM2Q99965 735 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 PITPNM3Q9BZ71 974 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 NRDE2Q9H7Z3 1164 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 DDIT4Q9NX09 232 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 DRG1Q9Y295 367 aaKnown RBP14.4□□□□□ -0.1
TRIM4-201ENST00000349062 MANSC4A6NHS7 340 aaPredicted RBP14.4□□□□□ -0.1
TRIM4-201ENST00000349062 YJEFN3A6XGL0 299 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 E7ENQ6 273 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 METTL18O95568 372 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 RNASELQ05823 741 aaKnown RBP14.4□□□□□ -0.1
TRIM4-201ENST00000349062 XRCC4Q13426 336 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 KCNA10Q16322 511 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 MPP5Q8N3R9 675 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 FNIP1Q8TF40 1166 aa14.4□□□□□ -0.1
TRIM4-201ENST00000349062 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.4□□□□□ -0.1
TRIM4-201ENST00000349062 SAT1P21673 171 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 FKBP1BP68106 108 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 SLC1A5Q15758 541 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 LVRNQ6Q4G3 990 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 CYP4V2Q6ZWL3 525 aaPredicted RBP14.39□□□□□ -0.11
TRIM4-201ENST00000349062 PCED1BQ96HM7 432 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 SYT15Q9BQS2 421 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 CNTN3Q9P232 1028 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 ZC3H7BQ9UGR2 993 aaKnown RBP14.39□□□□□ -0.11
TRIM4-201ENST00000349062 KIAA1257Q9ULG3 409 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 PADI3Q9ULW8 664 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 ARL5CA6NH57 179 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 PIRO00625 290 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 CHRNA1P02708 482 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 FAM200BP0CF97 657 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 CHRM1P11229 460 aaPredicted RBP14.39□□□□□ -0.11
TRIM4-201ENST00000349062 ADRA1DP25100 572 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 GMPRP36959 345 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 NOMO1Q15155 1222 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 ZBTB6Q15916 424 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 MROH9Q5TGP6 573 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 MFSD14CQ5VZR4 134 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 C17orf99Q6UX52 265 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 RSPH3Q86UC2 560 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 ZNF354CQ86Y25 554 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 HACE1Q8IYU2 909 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 LRRC52Q8N7C0 313 aa14.39□□□□□ -0.11
TRIM4-201ENST00000349062 PDCD7Q8N8D1 485 aaKnown RBP14.39□□□□□ -0.11
TRIM4-201ENST00000349062 KATNAL1Q9BW62 490 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms