RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 CUL2Q13617 745 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 TAZQ16635 292 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 ZACNQ401N2 412 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 DUSP28Q4G0W2 176 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 MORN1Q5T089 497 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 STXBP5Q5T5C0 1151 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 DNAJC24Q6P3W2 148 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 B3GNT6Q6ZMB0 384 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 TMEM126BQ8IUX1 230 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 SERAC1Q96JX3 654 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 CATSPER2Q96P56 530 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 TOPORSQ9NS56 1045 aaPredicted RBP16.43■□□□□ 0.22
HMGA1-202ENST00000347617 PPM1HQ9ULR3 514 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 PCDHB4Q9Y5E5 795 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 SIP14410 1827 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 HLA-DRAP01903 254 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 ITGA2BP08514 1039 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 SLC10A3P09131 477 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 VCLP18206 1134 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 RPL22P35268 128 aaKnown RBP16.43■□□□□ 0.22
HMGA1-202ENST00000347617 LIG4P49917 911 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 BTKQ06187 659 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 FAAP100Q0VG06 881 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 BST1Q10588 318 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 MYBPC3Q14896 1274 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 ADRM1Q16186 407 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 MSS51Q4VC12 460 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 PASD1Q8IV76 773 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 CATSPER1Q8NEC5 780 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 PRPF31Q8WWY3 499 aaKnown RBP16.43■□□□□ 0.22
HMGA1-202ENST00000347617 COPS5Q92905 334 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 NFKBIZQ9BYH8 718 aa16.43■□□□□ 0.22
HMGA1-202ENST00000347617 ALG13Q9NP73 1137 aaKnown RBP16.43■□□□□ 0.22
HMGA1-202ENST00000347617 A0A088AWK7 358 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 LRRIQ4A6NIV6 560 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 SDR42E2A6NKP2 422 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 GOLGA8SH3BPF8 625 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 GOLGA8MH3BSY2 632 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 SNNO75324 88 aaPredicted RBP16.42■□□□□ 0.22
HMGA1-202ENST00000347617 FAM200BP0CF97 657 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 HARSP12081 509 aaKnown RBP16.42■□□□□ 0.22
HMGA1-202ENST00000347617 CPA3P15088 417 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 DESP17661 470 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 ACAT1P24752 427 aaKnown RBP16.42■□□□□ 0.22
HMGA1-202ENST00000347617 CPOXP36551 454 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 CPA2P48052 419 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 SFSWAPQ12872 951 aaKnown RBP16.42■□□□□ 0.22
HMGA1-202ENST00000347617 MAP2K5Q13163 448 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 CAPSQ13938 189 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 HADHQ16836 314 aaKnown RBP16.42■□□□□ 0.22
HMGA1-202ENST00000347617 MMEL1Q495T6 779 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 TEX44Q53QW1 395 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 ANKRD22Q5VYY1 191 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 C17orf99Q6UX52 265 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 RAPH1Q70E73 1250 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 MARVELD2Q8N4S9 558 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 HHIPL1Q96JK4 782 aa16.42■□□□□ 0.22
HMGA1-202ENST00000347617 KLF6Q99612 283 aaPredicted RBP16.42■□□□□ 0.22
HMGA1-202ENST00000347617 HBS1LQ9Y450 684 aaKnown RBP16.42■□□□□ 0.22
HMGA1-202ENST00000347617 TCRBV5S1A1TA0A578 114 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 DENRO43583 198 aaKnown RBP16.41■□□□□ 0.22
HMGA1-202ENST00000347617 FAM189A1O60320 539 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 PRDX6P30041 224 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 OTUD4Q01804 1114 aaKnown RBP16.41■□□□□ 0.22
HMGA1-202ENST00000347617 KDSRQ06136 332 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 PDK3Q15120 406 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.41■□□□□ 0.22
HMGA1-202ENST00000347617 ARMC3Q5W041 872 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 LLGL2Q6P1M3 1020 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 PGM2L1Q6PCE3 622 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 DCUN1D2Q6PH85 259 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 NUDCD3Q8IVD9 361 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 ARID3BQ8IVW6 561 aaPredicted RBP16.41■□□□□ 0.22
HMGA1-202ENST00000347617 WDR75Q8IWA0 830 aaKnown RBP16.41■□□□□ 0.22
HMGA1-202ENST00000347617 CCDC33Q8N5R6 958 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 ICA1LQ8NDH6 482 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 ACTRT2Q8TDY3 377 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 DDI1Q8WTU0 396 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 ACAP3Q96P50 834 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 WDR83Q9BRX9 315 aaKnown RBP16.41■□□□□ 0.22
HMGA1-202ENST00000347617 ZCWPW1Q9H0M4 648 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 THAP1Q9NVV9 213 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 GALNT8Q9NY28 637 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 TEX264Q9Y6I9 313 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 A0A0B4J269 797 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 TCRBV9S1A1TA0A576 114 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 ARHGAP10A1A4S6 786 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 CHADO15335 359 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 BANF1O75531 89 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 KRT38O76015 456 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 LGALS2P05162 132 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 SERPINB9P50453 376 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 AQP5P55064 265 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 LAMTOR4Q0VGL1 99 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 TAF1CQ15572 869 aaPredicted RBP16.41■□□□□ 0.22
HMGA1-202ENST00000347617 ATP13A4Q4VNC1 1196 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 FAM43BQ6ZT52 329 aaPredicted RBP16.41■□□□□ 0.22
HMGA1-202ENST00000347617 IFNL1Q8IU54 200 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 ZBTB8OSQ8IWT0 167 aa16.41■□□□□ 0.22
HMGA1-202ENST00000347617 ACTL9Q8TC94 416 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms