RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 HPS4Q9NQG7 708 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 EHD3Q9NZN3 535 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 H2AFY2Q9P0M6 372 aaPredicted RBP12.44□□□□□ -0.42
COL12A1-202ENST00000345356 FEM1BQ9UK73 627 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 TDRKHQ9Y2W6 561 aaKnown RBP12.44□□□□□ -0.42
COL12A1-202ENST00000345356 ACOT9Q9Y305 439 aa12.44□□□□□ -0.42
COL12A1-202ENST00000345356 ZSCAN5DPP0CG00 497 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 MGAT5Q09328 741 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 BST1Q10588 318 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 KHDC1Q4VXA5 237 aaKnown RBP12.43□□□□□ -0.42
COL12A1-202ENST00000345356 KIF12Q96FN5 646 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 GINS4Q9BRT9 223 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 SLC5A4Q9NY91 659 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 AGAP1Q9UPQ3 857 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 QRICH2Q9H0J4 1663 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 IQGAP3Q86VI3 1631 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 TNPO2O14787 897 aaKnown RBP12.43□□□□□ -0.42
COL12A1-202ENST00000345356 EXTL3O43909 919 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 DGAT1O75907 488 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 RAD17O75943 681 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 PLA2G4FQ68DD2 849 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 DCUN1D1Q96GG9 259 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 GLI2P10070 1586 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 GH1P01241 217 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 C16orf46Q6P387 395 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 KYAT3Q6YP21 454 aaKnown RBP12.43□□□□□ -0.42
COL12A1-202ENST00000345356 SETD9Q8NE22 299 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 TMEM143Q96AN5 459 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 OSBPL6Q9BZF3 934 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 FAM49AQ9H0Q0 323 aaPredicted RBP12.43□□□□□ -0.42
COL12A1-202ENST00000345356 GPAMQ9HCL2 828 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 TRIM17Q9Y577 477 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 C6orf222P0C671 652 aaPredicted RBP12.43□□□□□ -0.42
COL12A1-202ENST00000345356 TPBGLP0DKB5 382 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 IL12AP29459 219 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 MPP3Q13368 585 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 NCF4Q15080 339 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 FAM98CQ17RN3 349 aaKnown RBP12.43□□□□□ -0.42
COL12A1-202ENST00000345356 SPOUT1Q5T280 376 aaKnown RBP12.43□□□□□ -0.42
COL12A1-202ENST00000345356 TMEM26Q6ZUK4 368 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 EID3Q8N140 333 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 PQLC1Q8N2U9 271 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 FIG4Q92562 907 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 CBWD1Q9BRT8 395 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 SPATA16Q9BXB7 569 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 FAM53CQ9NYF3 392 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 RWDD3Q9Y3V2 267 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 PKP3Q9Y446 797 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 ADCY10Q96PN6 1610 aa12.43□□□□□ -0.42
COL12A1-202ENST00000345356 KLHL33A6NCF5 533 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 ATG7O95352 703 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 SERPINA6P08185 405 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 ABHD2P08910 425 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 MMP14P50281 582 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 HIRAP54198 1017 aaPredicted RBP12.42□□□□□ -0.42
COL12A1-202ENST00000345356 SAPCD2Q86UD0 394 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 MCOLN2Q8IZK6 566 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 SFRP1Q8N474 314 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 SEMA4DQ92854 862 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 PLA2G12BQ9BX93 195 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 JMJD4Q9H9V9 463 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 ADSSP30520 456 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 HK2P52789 917 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 ADAM17P78536 824 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 FAM45BPQ6NSW5 357 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 AMIGO2Q86SJ2 522 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 KCTD17Q8N5Z5 321 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 DNAJC1Q96KC8 554 aaKnown RBP12.42□□□□□ -0.42
COL12A1-202ENST00000345356 PWWP2AQ96N64 755 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 CITED4Q96RK1 184 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 UNKQ9C0B0 810 aaKnown RBP12.42□□□□□ -0.42
COL12A1-202ENST00000345356 NUAK2Q9H093 628 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 NDUFAF1Q9Y375 327 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 ALOX15P16050 662 aaPredicted RBP12.42□□□□□ -0.42
COL12A1-202ENST00000345356 POU1F1P28069 291 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 EFNA5P52803 228 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 STXBP2Q15833 593 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 ZNF57Q68EA5 555 aaPredicted RBP12.42□□□□□ -0.42
COL12A1-202ENST00000345356 ZDHHC13Q8IUH4 622 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 NSUN6Q8TEA1 469 aaKnown RBP12.42□□□□□ -0.42
COL12A1-202ENST00000345356 WDR12Q9GZL7 423 aaKnown RBP12.42□□□□□ -0.42
COL12A1-202ENST00000345356 EBF2Q9HAK2 575 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 SLC12A4Q9UP95 1085 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 EIF3LQ9Y262 564 aaKnown RBP12.42□□□□□ -0.42
COL12A1-202ENST00000345356 NPHP4O75161 1426 aaPredicted RBP12.42□□□□□ -0.42
COL12A1-202ENST00000345356 SEMA3DO95025 777 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 MPOP05164 745 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 PRKCBP05771 671 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 ITGA2BP08514 1039 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 RASA1P20936 1047 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 PIK3R1P27986 724 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 CCNA1P78396 465 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 POLNQ7Z5Q5 900 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 TCAIMQ8N3R3 496 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 CLPTM1LQ96KA5 538 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 SPON2Q9BUD6 331 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 TUBGCP4Q9UGJ1 667 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 WDR37Q9Y2I8 494 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 BTNL10A8MVZ5 291 aa12.42□□□□□ -0.42
COL12A1-202ENST00000345356 ZNF197O14709 1029 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms