RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 KIAA1958Q8N8K9 716 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 PLD4Q96BZ4 506 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 SHDQ96IW2 340 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 SERPINB11Q96P15 392 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 DCLK3Q9C098 648 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 HPS4Q9NQG7 708 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 ADAMTS1Q9UHI8 967 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 PIAS3Q9Y6X2 628 aa21.72■■□□□ 1.07
SMARCB1-202ENST00000344921 KRBA1A5PL33 1030 aa21.71■■□□□ 1.07
SMARCB1-202ENST00000344921 AKR1B15C9JRZ8 316 aaPredicted RBP21.71■■□□□ 1.07
SMARCB1-202ENST00000344921 MFAP3LO75121 409 aa21.71■■□□□ 1.07
SMARCB1-202ENST00000344921 NFATC1O95644 943 aa21.71■■□□□ 1.07
SMARCB1-202ENST00000344921 CORO1AP31146 461 aaKnown RBP21.71■■□□□ 1.07
SMARCB1-202ENST00000344921 HARS2P49590 506 aaKnown RBP21.71■■□□□ 1.07
SMARCB1-202ENST00000344921 CDK17Q00537 523 aa21.71■■□□□ 1.07
SMARCB1-202ENST00000344921 NR1H3Q13133 447 aa21.71■■□□□ 1.07
SMARCB1-202ENST00000344921 TPRG1Q6ZUI0 275 aa21.71■■□□□ 1.07
SMARCB1-202ENST00000344921 DNAJC7Q99615 494 aa21.71■■□□□ 1.07
SMARCB1-202ENST00000344921 ABHD10Q9NUJ1 306 aa21.71■■□□□ 1.07
SMARCB1-202ENST00000344921 TAS2R14Q9NYV8 317 aa21.71■■□□□ 1.07
SMARCB1-202ENST00000344921 WDR35Q9P2L0 1181 aa21.71■■□□□ 1.07
SMARCB1-202ENST00000344921 SYNJ2BP-COX16A0A087WUM0 186 aa21.7■■□□□ 1.06
SMARCB1-202ENST00000344921 FAM86C2PA6NEL3 165 aa21.7■■□□□ 1.06
SMARCB1-202ENST00000344921 DDX3XO00571 662 aaKnown RBP eCLIP21.7■■□□□ 1.069e-12■■■■□ 22.2
SMARCB1-202ENST00000344921 DAB1O75553 588 aa21.7■■□□□ 1.06
SMARCB1-202ENST00000344921 SCNN1AP37088 669 aa21.7■■□□□ 1.06
SMARCB1-202ENST00000344921 TBX4P57082 545 aa21.7■■□□□ 1.06
SMARCB1-202ENST00000344921 C1QBPQ07021 282 aaKnown RBP21.7■■□□□ 1.06
SMARCB1-202ENST00000344921 MON1BQ7L1V2 547 aa21.7■■□□□ 1.06
SMARCB1-202ENST00000344921 DENND1CQ8IV53 801 aa21.7■■□□□ 1.06
SMARCB1-202ENST00000344921 ADGRG2Q8IZP9 1017 aa21.7■■□□□ 1.06
SMARCB1-202ENST00000344921 OTUB2Q96DC9 234 aa21.7■■□□□ 1.06
SMARCB1-202ENST00000344921 SLC2A13Q96QE2 648 aa21.7■■□□□ 1.06
SMARCB1-202ENST00000344921 ECT2Q9H8V3 914 aa21.7■■□□□ 1.06
SMARCB1-202ENST00000344921 FAM204AQ9H8W3 233 aa21.7■■□□□ 1.06
SMARCB1-202ENST00000344921 METTL5Q9NRN9 209 aaKnown RBP21.7■■□□□ 1.06
SMARCB1-202ENST00000344921 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.7■■□□□ 1.06
SMARCB1-202ENST00000344921 COX16Q9P0S2 106 aa21.7■■□□□ 1.06
SMARCB1-202ENST00000344921 ZNF510Q9Y2H8 683 aa21.7■■□□□ 1.06
SMARCB1-202ENST00000344921 KIF26AQ9ULI4 1882 aaPredicted RBP21.7■■□□□ 1.06
SMARCB1-202ENST00000344921 TRUB2O95900 331 aaKnown RBP21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 GZMAP12544 262 aa21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 HNRNPH3P31942 346 aaKnown RBP21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 GBP1P32455 592 aa21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 NOS2P35228 1153 aa21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 SOX9P48436 509 aa21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 PRKCQQ04759 706 aa21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 TBX2Q13207 712 aaPredicted RBP21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 TRIP4Q15650 581 aaPredicted RBP21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 TAC4Q86UU9 113 aa21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 FLCNQ8NFG4 579 aa21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 PBXIP1Q96AQ6 731 aa21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 SELENOOQ9BVL4 669 aa21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 C8orf33Q9H7E9 229 aaPredicted RBP21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 ARHGAP20Q9P2F6 1191 aa21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 OTOL1A6NHN0 477 aaPredicted RBP21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 MATKP42679 507 aa21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 PTP4A2Q12974 167 aa21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 MCOLN2Q8IZK6 566 aa21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 OLIG1Q8TAK6 271 aa21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 C1QTNF1Q9BXJ1 281 aa21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 DEF6Q9H4E7 631 aa21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 STAP1Q9ULZ2 295 aa21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 TLR6Q9Y2C9 796 aa21.69■■□□□ 1.06
SMARCB1-202ENST00000344921 CUL9Q8IWT3 2517 aa21.68■■□□□ 1.06
SMARCB1-202ENST00000344921 GREM1O60565 184 aa21.68■■□□□ 1.06
SMARCB1-202ENST00000344921 RTN2O75298 545 aa21.68■■□□□ 1.06
SMARCB1-202ENST00000344921 ADCY5O95622 1261 aa21.68■■□□□ 1.06
SMARCB1-202ENST00000344921 PDGFBP01127 241 aaPredicted RBP21.68■■□□□ 1.06
SMARCB1-202ENST00000344921 FTLP02792 175 aaPredicted RBP21.68■■□□□ 1.06
SMARCB1-202ENST00000344921 KLKB1P03952 638 aa21.68■■□□□ 1.06
SMARCB1-202ENST00000344921 CD72P21854 359 aa21.68■■□□□ 1.06
SMARCB1-202ENST00000344921 PITX1P78337 314 aaPredicted RBP21.68■■□□□ 1.06
SMARCB1-202ENST00000344921 AMPD2Q01433 879 aa21.68■■□□□ 1.06
SMARCB1-202ENST00000344921 UNC45BQ8IWX7 931 aa21.68■■□□□ 1.06
SMARCB1-202ENST00000344921 RNF34Q969K3 372 aa21.68■■□□□ 1.06
SMARCB1-202ENST00000344921 DDIT4Q9NX09 232 aa21.68■■□□□ 1.06
SMARCB1-202ENST00000344921 AGO1Q9UL18 857 aaKnown RBP21.68■■□□□ 1.06
SMARCB1-202ENST00000344921 TECTAO75443 2155 aa21.68■■□□□ 1.06
SMARCB1-202ENST00000344921 SPECC1L-ADORA2AF8WAN1 911 aa21.67■■□□□ 1.06
SMARCB1-202ENST00000344921 M0QYT0 321 aa21.67■■□□□ 1.06
SMARCB1-202ENST00000344921 KRT3P12035 628 aa21.67■■□□□ 1.06
SMARCB1-202ENST00000344921 GLULP15104 373 aa21.67■■□□□ 1.06
SMARCB1-202ENST00000344921 EIF4A3P38919 411 aaKnown RBP21.67■■□□□ 1.06
SMARCB1-202ENST00000344921 NME3Q13232 169 aa21.67■■□□□ 1.06
SMARCB1-202ENST00000344921 DHCR24Q15392 516 aa21.67■■□□□ 1.06
SMARCB1-202ENST00000344921 NUGGCQ68CJ6 796 aa21.67■■□□□ 1.06
SMARCB1-202ENST00000344921 DNAJC24Q6P3W2 148 aa21.67■■□□□ 1.06
SMARCB1-202ENST00000344921 WDR59Q6PJI9 974 aa21.67■■□□□ 1.06
SMARCB1-202ENST00000344921 ZNF852Q6ZMS4 543 aa21.67■■□□□ 1.06
SMARCB1-202ENST00000344921 Q6ZNB5 142 aa21.67■■□□□ 1.06
SMARCB1-202ENST00000344921 DNAAF5Q86Y56 855 aa21.67■■□□□ 1.06
SMARCB1-202ENST00000344921 C3orf20Q8ND61 904 aa21.67■■□□□ 1.06
SMARCB1-202ENST00000344921 VCPIP1Q96JH7 1222 aa21.67■■□□□ 1.06
SMARCB1-202ENST00000344921 TBC1D17Q9HA65 648 aa21.67■■□□□ 1.06
SMARCB1-202ENST00000344921 RRN3Q9NYV6 651 aa21.67■■□□□ 1.06
SMARCB1-202ENST00000344921 TMEM59LQ9UK28 342 aa21.67■■□□□ 1.06
SMARCB1-202ENST00000344921 MAN2B1O00754 1011 aa21.66■■□□□ 1.06
SMARCB1-202ENST00000344921 ADH1CP00326 375 aa21.66■■□□□ 1.06
SMARCB1-202ENST00000344921 CTHP32929 405 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms