RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 NAMPTP43490 491 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 PRKG1Q13976 671 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 AHI1Q8N157 1196 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 EFHD2Q96C19 240 aaPredicted RBP13.99□□□□□ -0.17
TRIO-202ENST00000344204 PCDH9Q9HC56 1237 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 PLK2Q9NYY3 685 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 GNB5O14775 395 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 TMEM26Q6ZUK4 368 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 DENND6AQ8IWF6 608 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 NEDD1Q8NHV4 660 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 MCFD2Q8NI22 146 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 FBXO6Q9NRD1 293 aaPredicted RBP13.99□□□□□ -0.17
TRIO-202ENST00000344204 ARL8BQ9NVJ2 186 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 IGSF1Q8N6C5 1336 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 GJB6O95452 261 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 BTDP43251 543 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 TRAP1Q12931 704 aaKnown RBP13.99□□□□□ -0.17
TRIO-202ENST00000344204 NT5DC3Q86UY8 548 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 ZNF222Q9UK12 451 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 ADGRA2Q96PE1 1338 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 FASTKQ14296 549 aaKnown RBP13.99□□□□□ -0.17
TRIO-202ENST00000344204 FUT11Q495W5 492 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 OTOAQ7RTW8 1153 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 EXD1Q8NHP7 514 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 HSPBAP1Q96EW2 488 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 USP17L5A8MUK1 530 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 PRKAA1Q13131 559 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 TMEM139Q8IV31 216 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 DGKBQ9Y6T7 804 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 PRKAR1AP10644 381 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 PABPC1P11940 636 aaKnown RBP13.99□□□□□ -0.17
TRIO-202ENST00000344204 GZMAP12544 262 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 TPTEP56180 551 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 KRT74Q7RTS7 529 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 PIGWQ7Z7B1 504 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 CEP170P1Q96L14 293 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 CAPN8A6NHC0 703 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 DRG2P55039 364 aaKnown RBP13.99□□□□□ -0.17
TRIO-202ENST00000344204 DYNLL1P63167 89 aaKnown RBP13.99□□□□□ -0.17
TRIO-202ENST00000344204 KHDC1Q4VXA5 237 aaKnown RBP13.99□□□□□ -0.17
TRIO-202ENST00000344204 ECHDC2Q86YB7 292 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 EPB41L1Q9H4G0 881 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 ZNF219Q9P2Y4 722 aaPredicted RBP13.99□□□□□ -0.17
TRIO-202ENST00000344204 PRPF19Q9UMS4 504 aaKnown RBP13.99□□□□□ -0.17
TRIO-202ENST00000344204 ARHGEF28Q8N1W1 1705 aaKnown RBP13.99□□□□□ -0.17
TRIO-202ENST00000344204 TM7SF2O76062 418 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 MYL4P12829 197 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 NME5P56597 212 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 FRG1Q14331 258 aaKnown RBP13.99□□□□□ -0.17
TRIO-202ENST00000344204 ADCY4Q8NFM4 1077 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 NSMCE3Q96MG7 304 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 UBXN6Q9BZV1 441 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 SYTL2Q9HCH5 934 aa13.99□□□□□ -0.17
TRIO-202ENST00000344204 EIF3DO15371 548 aaKnown RBP eCLIP13.98□□□□□ -0.174e-7■■□□□ 13.2
TRIO-202ENST00000344204 ILDR1Q86SU0 546 aaPredicted RBP13.98□□□□□ -0.17
TRIO-202ENST00000344204 LRRC17Q8N6Y2 441 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 PICK1Q9NRD5 415 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 A2ML1A8K2U0 1454 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 AXIN1O15169 862 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 COX4I1P13073 169 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 PEX2P28328 305 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 PEX3P56589 373 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 SPDYAQ5MJ70 313 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 ANO7Q6IWH7 933 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 NECAB2Q7Z6G3 386 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 CCDC126Q96EE4 140 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 TCF12Q99081 682 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 SEPHS2Q99611 448 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 ZNF624Q9P2J8 865 aaPredicted RBP13.98□□□□□ -0.17
TRIO-202ENST00000344204 ZNF232Q9UNY5 417 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 ATP8B3O60423 1300 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 TIMM44O43615 452 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 ZNF24P17028 368 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 STAT3P40763 770 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 THUMPD3Q9BV44 507 aaKnown RBP13.98□□□□□ -0.17
TRIO-202ENST00000344204 HEATR1Q9H583 2144 aaKnown RBP13.98□□□□□ -0.17
TRIO-202ENST00000344204 CST8O60676 142 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 NMT2O60551 498 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 CPA3P15088 417 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 KIAA0408Q6ZU52 694 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 ACAD9Q9H845 621 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 MLXQ9UH92 298 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 MAGEA10P43363 369 aaPredicted RBP13.98□□□□□ -0.17
TRIO-202ENST00000344204 SNAP25P60880 206 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 NME3Q13232 169 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 CCNG2Q16589 344 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 C5orf22Q49AR2 442 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 SEPT12Q8IYM1 358 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 CASS4Q9NQ75 786 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 RGL2O15211 777 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 ADAMTS2O95450 1211 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 FAM83EQ2M2I3 478 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 CERKLQ49MI3 558 aaPredicted RBP13.98□□□□□ -0.17
TRIO-202ENST00000344204 ZBTB46Q86UZ6 589 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 ASAP1Q9ULH1 1129 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 EFCAB6Q5THR3 1501 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 FARP2O94887 1054 aaPredicted RBP13.98□□□□□ -0.17
TRIO-202ENST00000344204 SYDE2Q5VT97 1194 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 AGAP1Q9UPQ3 857 aa13.98□□□□□ -0.17
TRIO-202ENST00000344204 PMF1-BGLAPU3KQ54 211 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms