RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 CBX5P45973 191 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 RARRES1P49788 294 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 RTP1P59025 263 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 CDK18Q07002 472 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 SEL1L2Q5TEA6 688 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 SPOPLQ6IQ16 392 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 UNC5DQ6UXZ4 953 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 B3GNT6Q6ZMB0 384 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 INTS8Q75QN2 995 aaKnown RBP9.06□□□□□ -0.96
SP140-201ENST00000343805 ZNF564Q8TBZ8 553 aaPredicted RBP9.06□□□□□ -0.96
SP140-201ENST00000343805 HERVK_113Q902F9 699 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 DGCR14Q96DF8 476 aaKnown RBP9.06□□□□□ -0.96
SP140-201ENST00000343805 CFAP36Q96G28 342 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 COX4I2Q96KJ9 171 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 KREMEN1Q96MU8 473 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 DHRS9Q9BPW9 319 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 ASPSCR1Q9BZE9 553 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 SCPEP1Q9HB40 452 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 LATS2Q9NRM7 1088 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 TELO2Q9Y4R8 837 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 CENPFP49454 3210 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 KIF13BQ9NQT8 1826 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 UBR3Q6ZT12 1888 aa9.06□□□□□ -0.96
SP140-201ENST00000343805 GOLGA8MH3BSY2 632 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 ENTPD3O75355 529 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 GSSP48637 474 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 TRAP1Q12931 704 aaKnown RBP9.05□□□□□ -0.96
SP140-201ENST00000343805 RCN2Q14257 317 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 FYB2Q5VWT5 728 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 DUPD1Q68J44 220 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 ALKBH2Q6NS38 261 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 NEK5Q6P3R8 708 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 LRIG3Q6UXM1 1119 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 PRUNE1Q86TP1 453 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 CLVS1Q8IUQ0 354 aaPredicted RBP9.05□□□□□ -0.96
SP140-201ENST00000343805 SLC38A6Q8IZM9 456 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 PAF1Q8N7H5 531 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 EXD1Q8NHP7 514 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 TTC8Q8TAM2 541 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 TAS1R2Q8TE23 839 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 ACCSQ96QU6 501 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 DDX23Q9BUQ8 820 aaKnown RBP9.05□□□□□ -0.96
SP140-201ENST00000343805 MTFR1LQ9H019 292 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 EHMT1Q9H9B1 1298 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 TDRKHQ9Y2W6 561 aaKnown RBP9.05□□□□□ -0.96
SP140-201ENST00000343805 ZNF831Q5JPB2 1677 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 KIAA0391O15091 583 aaKnown RBP9.05□□□□□ -0.96
SP140-201ENST00000343805 ZC3H11AO75152 810 aaKnown RBP eCLIP9.05□□□□□ -0.96
SP140-201ENST00000343805 LYNP07948 512 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 GTF2H1P32780 548 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 QARSP47897 775 aaKnown RBP9.05□□□□□ -0.96
SP140-201ENST00000343805 RPS3AP61247 264 aaKnown RBP9.05□□□□□ -0.96
SP140-201ENST00000343805 MRPS9P82933 396 aaKnown RBP9.05□□□□□ -0.96
SP140-201ENST00000343805 NFE2L1Q14494 772 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 MAPRE2Q15555 327 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 SNRNP35Q16560 246 aaKnown RBP9.05□□□□□ -0.96
SP140-201ENST00000343805 WASHC2DQ5SRD0 308 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 ARHGAP24Q8N264 748 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 NATD1Q8N6N6 113 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.05□□□□□ -0.96
SP140-201ENST00000343805 CPA5Q8WXQ8 436 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 POMGNT1Q8WZA1 660 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 SAMD11Q96NU1 681 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 ZSWIM1Q9BR11 485 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 ECT2Q9H8V3 914 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 ASIC3Q9UHC3 531 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 FOCADQ5VW36 1801 aa9.05□□□□□ -0.96
SP140-201ENST00000343805 DENND3A2RUS2 1198 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 FUOMA2VDF0 154 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 SOBPA7XYQ1 873 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 MUSKO15146 869 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 YKT6O15498 198 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 CNOT3O75175 753 aaKnown RBP9.04□□□□□ -0.96
SP140-201ENST00000343805 ENO2P09104 434 aaPredicted RBP9.04□□□□□ -0.96
SP140-201ENST00000343805 COL6A1P12109 1028 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 CREB1P16220 341 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 CHRNB2P17787 502 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 PHBP35232 272 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 COPS2P61201 443 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 RPS6P62753 249 aaKnown RBP9.04□□□□□ -0.96
SP140-201ENST00000343805 STILQ15468 1287 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 SLC15A2Q16348 729 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 PHKG1Q16816 387 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 HP1BP3Q5SSJ5 553 aaPredicted RBP9.04□□□□□ -0.96
SP140-201ENST00000343805 C1orf220Q5T0J3 134 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 CORO6Q6QEF8 472 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 ANO5Q75V66 913 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 CYFIP1Q7L576 1253 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 ANKRD42Q8N9B4 389 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 CCDC74AQ96AQ1 378 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 EME1Q96AY2 570 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 KLHL29Q96CT2 875 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 XPO6Q96QU8 1125 aaKnown RBP9.04□□□□□ -0.96
SP140-201ENST00000343805 APBA2Q99767 749 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 PRMT1Q99873 361 aaKnown RBP9.04□□□□□ -0.96
SP140-201ENST00000343805 SYT11Q9BT88 431 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 C12orf4Q9NQ89 552 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 ZDHHC18Q9NUE0 388 aa9.04□□□□□ -0.96
SP140-201ENST00000343805 ZC3H7BQ9UGR2 993 aaKnown RBP9.04□□□□□ -0.96
SP140-201ENST00000343805 A8MUI8 341 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms