RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 FAM8A1Q9UBU6 413 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 SERTAD1Q9UHV2 236 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 REXO2Q9Y3B8 237 aaKnown RBP17.49■□□□□ 0.39
CDK11B-201ENST00000340677 WASF2Q9Y6W5 498 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 PHIPQ8WWQ0 1821 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 C1orf232A0A0U1RR37 186 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 FAM170AA1A519 330 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 CHURC1-FNTBB4DL54 471 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 USP17L10C9JJH3 530 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 TEX33O43247 280 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 CCDC22O60826 627 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 NDUFS6O75380 124 aaKnown RBP17.49■□□□□ 0.39
CDK11B-201ENST00000340677 ITGB3P05106 788 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 FAM228BP0C875 321 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 FDX1P10109 184 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 HPGDP15428 266 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 TARSP26639 723 aaKnown RBP17.49■□□□□ 0.39
CDK11B-201ENST00000340677 GSTM2P28161 218 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 RFC1P35251 1148 aaPredicted RBP17.49■□□□□ 0.39
CDK11B-201ENST00000340677 C21orf59P57076 290 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 LPGAT1Q92604 370 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 ZNF341Q9BYN7 854 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 TRIM8Q9BZR9 551 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 HAUS4Q9H6D7 363 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 EPS8L2Q9H6S3 715 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 LIN7BQ9HAP6 207 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 ATP13A2Q9NQ11 1180 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 CEP72Q9P209 647 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 CNTN3Q9P232 1028 aa17.49■□□□□ 0.39
CDK11B-201ENST00000340677 POLR2DO15514 142 aaKnown RBP17.48■□□□□ 0.39
CDK11B-201ENST00000340677 CDH2P19022 906 aaPredicted RBP17.48■□□□□ 0.39
CDK11B-201ENST00000340677 MARK3P27448 753 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 SLC5A3P53794 718 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 CDC16Q13042 620 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 SKIV2LQ15477 1246 aaKnown RBP17.48■□□□□ 0.39
CDK11B-201ENST00000340677 ALFQ53S48 1182 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 FAM160B2Q86V87 743 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 ZNF410Q86VK4 478 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 KCTD4Q8WVF5 259 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 SLC7A6OSQ96CW6 309 aaPredicted RBP17.48■□□□□ 0.39
CDK11B-201ENST00000340677 HEXIM2Q96MH2 286 aaKnown RBP17.48■□□□□ 0.39
CDK11B-201ENST00000340677 MOV10Q9HCE1 1003 aaKnown RBP17.48■□□□□ 0.39
CDK11B-201ENST00000340677 SNTG2Q9NY99 539 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 DTLQ9NZJ0 730 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 THEGQ9P2T0 379 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 VPS4AQ9UN37 437 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 SIK3Q9Y2K2 1263 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 MAGED1Q9Y5V3 778 aaPredicted RBP17.48■□□□□ 0.39
CDK11B-201ENST00000340677 STON1Q9Y6Q2 735 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 SCN4AP35499 1836 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 ANO9A1A5B4 782 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 NDUFS2O75306 463 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 YBX3P16989 372 aaKnown RBP eCLIP17.48■□□□□ 0.39
CDK11B-201ENST00000340677 LRPAP1P30533 357 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 C21orf58P58505 322 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 MGAT5Q09328 741 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 SMAD4Q13485 552 aaKnown RBP17.48■□□□□ 0.39
CDK11B-201ENST00000340677 TRPC3Q13507 836 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 NR1I3Q14994 352 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 ZNF829Q3KNS6 432 aaPredicted RBP17.48■□□□□ 0.39
CDK11B-201ENST00000340677 VARS2Q5ST30 1063 aaKnown RBP17.48■□□□□ 0.39
CDK11B-201ENST00000340677 PLBD1Q6P4A8 553 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 PAOXQ6QHF9 649 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 CHURC1Q8WUH1 139 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 SELENOSQ9BQE4 189 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 ADARB2Q9NS39 739 aaKnown RBP17.48■□□□□ 0.39
CDK11B-201ENST00000340677 GIMAP4Q9NUV9 329 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 SMARCAL1Q9NZC9 954 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 RNF181Q9P0P0 153 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 EPN1Q9Y6I3 576 aaPredicted RBP17.48■□□□□ 0.39
CDK11B-201ENST00000340677 PAPPA2Q9BXP8 1791 aa17.48■□□□□ 0.39
CDK11B-201ENST00000340677 KPNA5O15131 536 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 PPP1R11O60927 126 aaPredicted RBP17.47■□□□□ 0.39
CDK11B-201ENST00000340677 ADAM11O75078 769 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 HEXIM1O94992 359 aaKnown RBP17.47■□□□□ 0.39
CDK11B-201ENST00000340677 ZNF18P17022 549 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 CLK2P49760 499 aaKnown RBP17.47■□□□□ 0.39
CDK11B-201ENST00000340677 BTKQ06187 659 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 FCHO2Q0JRZ9 810 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 MED21Q13503 144 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 QRICH1Q2TAL8 776 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 USP50Q70EL3 339 aaPredicted RBP17.47■□□□□ 0.39
CDK11B-201ENST00000340677 STRA8Q7Z7C7 330 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 STK32CQ86UX6 486 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 CCDC36Q8IYA8 594 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 CLIP4Q8N3C7 705 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 TRPM4Q8TD43 1214 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 LPAR1Q92633 364 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 CNDP1Q96KN2 507 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 TRIM47Q96LD4 638 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 HOXD1Q9GZZ0 328 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 ADAM7Q9H2U9 754 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 LIN28AQ9H9Z2 209 aaKnown RBP17.47■□□□□ 0.39
CDK11B-201ENST00000340677 FGFR1OP2Q9NVK5 253 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 TNFRSF10DQ9UBN6 386 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 SMG5Q9UPR3 1016 aaKnown RBP17.47■□□□□ 0.39
CDK11B-201ENST00000340677 HYOU1Q9Y4L1 999 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 OR5K3A6NET4 321 aa17.47■□□□□ 0.39
CDK11B-201ENST00000340677 TLR3O15455 904 aaKnown RBP17.47■□□□□ 0.39
CDK11B-201ENST00000340677 AP1G1O43747 822 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms