RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 A0A1B0GTH6 734 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 A0A1W2PQC6 194 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 HOXC11O43248 304 aaPredicted RBP20.03■□□□□ 0.8
SYNE4-202ENST00000340477 CYBBP04839 570 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 TPM3P06753 285 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 GLI1P08151 1106 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 GALK1P51570 392 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 CCR3P51677 355 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 YWHAZP63104 245 aaKnown RBP20.03■□□□□ 0.8
SYNE4-202ENST00000340477 CDR2Q01850 454 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 TCF15Q12870 199 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 NUGGCQ68CJ6 796 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 OR6B2Q6IFH4 312 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 FSTL4Q6MZW2 842 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 TRIM72Q6ZMU5 477 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 Q6ZNB5 142 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 BEND5Q7L4P6 421 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 NOP9Q86U38 636 aaKnown RBP20.03■□□□□ 0.8
SYNE4-202ENST00000340477 WBP2Q969T9 261 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 CHFRQ96EP1 664 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 XPO6Q96QU8 1125 aaKnown RBP20.03■□□□□ 0.8
SYNE4-202ENST00000340477 PNKPQ96T60 521 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 BBS2Q9BXC9 721 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 RBM12Q9NTZ6 932 aaKnown RBP20.03■□□□□ 0.8
SYNE4-202ENST00000340477 ASNSD1Q9NWL6 643 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 MYOFQ9NZM1 2061 aa20.03■□□□□ 0.8
SYNE4-202ENST00000340477 KIAA1549LQ6ZVL6 1849 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 NEDD8-MDP1E9PL57 170 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 H0Y858 1186 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 TEX33O43247 280 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 GREM1O60565 184 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 HSF2BPO75031 334 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 ATG13O75143 517 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 APODP05090 189 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 FANCCQ00597 558 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 ARID5AQ03989 594 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 MTAPQ13126 283 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 FZD5Q13467 585 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 TRIP4Q15650 581 aaPredicted RBP20.02■□□□□ 0.8
SYNE4-202ENST00000340477 TPGS1Q6ZTW0 290 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 ERICH1Q86X53 443 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 DENND1CQ8IV53 801 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 UNC45BQ8IWX7 931 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 SPEM1Q8N4L4 309 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 WDTC1Q8N5D0 677 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 FAM122AQ96E09 287 aa20.02■□□□□ 0.8
SYNE4-202ENST00000340477 MSI1O43347 362 aaKnown RBP20.01■□□□□ 0.79
SYNE4-202ENST00000340477 LATS1O95835 1130 aa20.01■□□□□ 0.79
SYNE4-202ENST00000340477 EGFP01133 1207 aa20.01■□□□□ 0.79
SYNE4-202ENST00000340477 MMEP08473 750 aa20.01■□□□□ 0.79
SYNE4-202ENST00000340477 FERP16591 822 aa20.01■□□□□ 0.79
SYNE4-202ENST00000340477 CDH5P33151 784 aaPredicted RBP20.01■□□□□ 0.79
SYNE4-202ENST00000340477 OPRD1P41143 372 aa20.01■□□□□ 0.79
SYNE4-202ENST00000340477 TBX4P57082 545 aa20.01■□□□□ 0.79
SYNE4-202ENST00000340477 ZNF445P59923 1031 aa20.01■□□□□ 0.79
SYNE4-202ENST00000340477 NNTQ13423 1086 aa20.01■□□□□ 0.79
SYNE4-202ENST00000340477 PTPN20Q4JDL3 420 aa20.01■□□□□ 0.79
SYNE4-202ENST00000340477 FAM183BPQ6ZVS7 135 aa20.01■□□□□ 0.79
SYNE4-202ENST00000340477 DQX1Q8TE96 717 aaKnown RBP20.01■□□□□ 0.79
SYNE4-202ENST00000340477 ARHGEF4Q9NR80 690 aa20.01■□□□□ 0.79
SYNE4-202ENST00000340477 MARK1Q9P0L2 795 aa20.01■□□□□ 0.79
SYNE4-202ENST00000340477 DEC1Q9P2X7 70 aa20.01■□□□□ 0.79
SYNE4-202ENST00000340477 NOCTQ9UK39 431 aaKnown RBP20.01■□□□□ 0.79
SYNE4-202ENST00000340477 FBXO4Q9UKT5 387 aa20.01■□□□□ 0.79
SYNE4-202ENST00000340477 AGO1Q9UL18 857 aaKnown RBP20.01■□□□□ 0.79
SYNE4-202ENST00000340477 MYO6Q9UM54 1294 aa20.01■□□□□ 0.79
SYNE4-202ENST00000340477 NAALADL1Q9UQQ1 740 aa20.01■□□□□ 0.79
SYNE4-202ENST00000340477 APOEP02649 317 aa20■□□□□ 0.79
SYNE4-202ENST00000340477 ERBB2P04626 1255 aa20■□□□□ 0.79
SYNE4-202ENST00000340477 SLC11A2P49281 568 aa20■□□□□ 0.79
SYNE4-202ENST00000340477 UBASH3AP57075 661 aa20■□□□□ 0.79
SYNE4-202ENST00000340477 CDK17Q00537 523 aa20■□□□□ 0.79
SYNE4-202ENST00000340477 SLC6A3Q01959 620 aa20■□□□□ 0.79
SYNE4-202ENST00000340477 KDSRQ06136 332 aa20■□□□□ 0.79
SYNE4-202ENST00000340477 RING1Q06587 406 aa20■□□□□ 0.79
SYNE4-202ENST00000340477 NAA35Q5VZE5 725 aa20■□□□□ 0.79
SYNE4-202ENST00000340477 ZC3H14Q6PJT7 736 aaKnown RBP20■□□□□ 0.79
SYNE4-202ENST00000340477 LRSAM1Q6UWE0 723 aa20■□□□□ 0.79
SYNE4-202ENST00000340477 Q6ZS52 159 aa20■□□□□ 0.79
SYNE4-202ENST00000340477 TMEM25Q86YD3 366 aa20■□□□□ 0.79
SYNE4-202ENST00000340477 SLC20A1Q8WUM9 679 aa20■□□□□ 0.79
SYNE4-202ENST00000340477 DDX1Q92499 740 aaKnown RBP20■□□□□ 0.79
SYNE4-202ENST00000340477 ACDQ96AP0 544 aa20■□□□□ 0.79
SYNE4-202ENST00000340477 C18orf8Q96DM3 657 aa20■□□□□ 0.79
SYNE4-202ENST00000340477 DDX50Q9BQ39 737 aaKnown RBP20■□□□□ 0.79
SYNE4-202ENST00000340477 FAM204AQ9H8W3 233 aa20■□□□□ 0.79
SYNE4-202ENST00000340477 SEPT11Q9NVA2 429 aaKnown RBP20■□□□□ 0.79
SYNE4-202ENST00000340477 DNAJC17Q9NVM6 304 aaKnown RBP20■□□□□ 0.79
SYNE4-202ENST00000340477 RNF40O75150 1001 aa19.99■□□□□ 0.79
SYNE4-202ENST00000340477 KAT7O95251 611 aa19.99■□□□□ 0.79
SYNE4-202ENST00000340477 KLKB1P03952 638 aa19.99■□□□□ 0.79
SYNE4-202ENST00000340477 TYRP14679 529 aa19.99■□□□□ 0.79
SYNE4-202ENST00000340477 GBP1P32455 592 aa19.99■□□□□ 0.79
SYNE4-202ENST00000340477 GRIA2P42262 883 aa19.99■□□□□ 0.79
SYNE4-202ENST00000340477 CXCL12P48061 93 aa19.99■□□□□ 0.79
SYNE4-202ENST00000340477 NOMO3P69849 1222 aa19.99■□□□□ 0.79
SYNE4-202ENST00000340477 NHLH1Q02575 133 aa19.99■□□□□ 0.79
SYNE4-202ENST00000340477 CSTF1Q05048 431 aaKnown RBP19.99■□□□□ 0.79
SYNE4-202ENST00000340477 DCAF6Q58WW2 860 aa19.99■□□□□ 0.79
SYNE4-202ENST00000340477 NAIF1Q69YI7 327 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms