RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 ENOPH1Q9UHY7 261 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 PLCL2Q9UPR0 1127 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 IRAK3Q9Y616 596 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 CST8O60676 142 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 LDLRP01130 860 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 FCER1AP12319 257 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 NPR2P20594 1047 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 CYP24A1Q07973 514 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 COPS4Q9BT78 406 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.17□□□□□ -0.3
USP47-202ENST00000339865 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.17□□□□□ -0.3
USP47-202ENST00000339865 VPS9D1Q9Y2B5 631 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 DNAJC16Q9Y2G8 782 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 A0A087WXM4 84 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 ASB14A6NK59 587 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 WWP2O00308 870 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 STAU1O95793 577 aaKnown RBP13.17□□□□□ -0.3
USP47-202ENST00000339865 BIKQ13323 160 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 KCNB1Q14721 858 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 TTC27Q6P3X3 843 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 HAUS6Q7Z4H7 955 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 AMER2Q8N7J2 671 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 SERAC1Q96JX3 654 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 STK33Q9BYT3 514 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 APEX2Q9UBZ4 518 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 SMIM22K7EJ46 135 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 ATMINO43313 823 aaPredicted RBP13.16□□□□□ -0.3
USP47-202ENST00000339865 APOC1P02654 83 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 IFNGR2P38484 337 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 OMPP47874 163 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 ACOT2P49753 483 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 ALDH3A2P51648 485 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 TCEA2Q15560 299 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 PHACTR4Q8IZ21 702 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 PHF21BQ96EK2 531 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 CCDC167Q9P0B6 97 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 OGDHLQ9ULD0 1010 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 USP17L15C9J2P7 530 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 USP17L13C9JLJ4 530 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 USP17L11C9JVI0 530 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 USP17L18D6R9N7 530 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 USP17L22D6RA61 530 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 USP17L17D6RBQ6 530 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 USP17L19D6RCP7 530 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 USP17L20D6RJB6 530 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 SERPINA3P01011 423 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 EIF4A1P60842 406 aaKnown RBP13.16□□□□□ -0.3
USP47-202ENST00000339865 USP17L24Q0WX57 530 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 USP17L6PQ6QN14 398 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 TEKT5Q96M29 485 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 CLCC1Q96S66 551 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 NUDT12Q9BQG2 462 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 MAP3K6O95382 1288 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 PGK1P00558 417 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 IL12AP29459 219 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 FAXCQ5TGI0 409 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 PCNX4Q63HM2 1172 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 CYP2R1Q6VVX0 501 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 SLC4A9Q96Q91 983 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 TSPOAP1O95153 1857 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 RRN3P2A6NIE6 340 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 GLRA3O75311 464 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 KATNA1O75449 491 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 NCAM1P13591 858 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 CDK8P49336 464 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 SFSWAPQ12872 951 aaKnown RBP13.16□□□□□ -0.3
USP47-202ENST00000339865 CNPY3Q9BT09 278 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 SH3GLB2Q9NR46 395 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 AGPAT5Q9NUQ2 364 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 ERI2A8K979 691 aaKnown RBP13.16□□□□□ -0.3
USP47-202ENST00000339865 PECAM1P16284 738 aaPredicted RBP13.16□□□□□ -0.3
USP47-202ENST00000339865 ZMYND11Q15326 602 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 PSMD5Q16401 504 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 ZFP69Q49AA0 526 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 RNF148Q8N7C7 305 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 MINDY2Q8NBR6 621 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 BPIFB6Q8NFQ5 453 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 CCDC3Q9BQI4 270 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 C9orf16Q9BUW7 83 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 LARGE1O95461 756 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 CCR4P51679 360 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 XRCC4Q13426 336 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 FAM160B2Q86V87 743 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 TNKS2Q9H2K2 1166 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 CIDEBQ9UHD4 219 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 ADGRL1O94910 1474 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 CHL1O00533 1208 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 RAG1P15918 1043 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 IDH2P48735 452 aaKnown RBP13.16□□□□□ -0.3
USP47-202ENST00000339865 HARS2P49590 506 aaKnown RBP13.16□□□□□ -0.3
USP47-202ENST00000339865 PLA2G4FQ68DD2 849 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 DHRSXQ8N5I4 330 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 KBTBD7Q8WVZ9 684 aa13.16□□□□□ -0.3
USP47-202ENST00000339865 ATXN2Q99700 1313 aaKnown RBP13.15□□□□□ -0.3
USP47-202ENST00000339865 MGRN1O60291 552 aa13.15□□□□□ -0.3
USP47-202ENST00000339865 RLN1P04808 185 aa13.15□□□□□ -0.3
USP47-202ENST00000339865 RGS1Q08116 209 aa13.15□□□□□ -0.3
USP47-202ENST00000339865 GALNTL5Q7Z4T8 443 aa13.15□□□□□ -0.3
USP47-202ENST00000339865 FLAD1Q8NFF5 587 aa13.15□□□□□ -0.3
USP47-202ENST00000339865 EIF2AK1Q9BQI3 630 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms