RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 RPL22P35268 128 aaKnown RBP11.51□□□□□ -0.57
LRP1-202ENST00000338962 MATKP42679 507 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 CCT5P48643 541 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 WDR5P61964 334 aaKnown RBP11.51□□□□□ -0.57
LRP1-202ENST00000338962 STAT4Q14765 748 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 CA9Q16790 459 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 TNFAIP8L3Q5GJ75 292 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 C1orf228Q6PIY5 440 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 ZBED8Q8IZ13 594 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 SIX6OS1Q8N1H7 587 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 PLD5Q8N7P1 536 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 PHOSPHO2Q8TCD6 241 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 CENPIQ92674 756 aaPredicted RBP11.51□□□□□ -0.57
LRP1-202ENST00000338962 DHX35Q9H5Z1 703 aaKnown RBP11.51□□□□□ -0.57
LRP1-202ENST00000338962 KRT82Q9NSB4 513 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 TMEM161AQ9NX61 479 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 TET1Q8NFU7 2136 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 LTBP2Q14767 1821 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 ZNF487B1APH4 448 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 H7C0C1 242 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 CDH16O75309 829 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 ATP5OP48047 213 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 SEC24CP53992 1094 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 BASP1P80723 227 aaKnown RBP11.51□□□□□ -0.57
LRP1-202ENST00000338962 PDIA2Q13087 525 aaKnown RBP11.51□□□□□ -0.57
LRP1-202ENST00000338962 DPYSL2Q16555 572 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 SLC9A4Q6AI14 798 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 CLEC20AQ6ZU45 233 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 B4GALNT4Q76KP1 1039 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 STRADAQ7RTN6 431 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 MDM1Q8TC05 714 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 CPT1BQ92523 772 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 PRO3102Q9H379 93 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 MIOSQ9NXC5 875 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 CXXC1Q9P0U4 656 aaPredicted RBP11.51□□□□□ -0.57
LRP1-202ENST00000338962 AP4E1Q9UPM8 1137 aa11.51□□□□□ -0.57
LRP1-202ENST00000338962 TIMM13Q9Y5L4 95 aaPredicted RBP11.51□□□□□ -0.57
LRP1-202ENST00000338962 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.51□□□□□ -0.57
LRP1-202ENST00000338962 EXOC1LA0A1B0GW35 172 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 SMAPO00193 183 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 TRAPPC3O43617 180 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 BEST1O76090 585 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 AMHP03971 560 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 CHN1P15882 459 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 ATXN1P54253 815 aaKnown RBP11.5□□□□□ -0.57
LRP1-202ENST00000338962 MAP3K7CLP57077 242 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 YWHAZP63104 245 aaKnown RBP11.5□□□□□ -0.57
LRP1-202ENST00000338962 MRPS5P82675 430 aaKnown RBP11.5□□□□□ -0.57
LRP1-202ENST00000338962 FASTKD3Q14CZ7 662 aaKnown RBP11.5□□□□□ -0.57
LRP1-202ENST00000338962 UPP1Q16831 310 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 SLC25A52Q3SY17 297 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 CCDC38Q502W7 563 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 DCAF6Q58WW2 860 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 HP1BP3Q5SSJ5 553 aaPredicted RBP11.5□□□□□ -0.57
LRP1-202ENST00000338962 PAQR9Q6ZVX9 377 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 NLRP14Q86W24 1093 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 NPAS4Q8IUM7 802 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 TAB3Q8N5C8 712 aaPredicted RBP11.5□□□□□ -0.57
LRP1-202ENST00000338962 PQLC3Q8N755 202 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 NAT8LQ8N9F0 302 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 C3orf58Q8NDZ4 430 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 PCDH19Q8TAB3 1148 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 RSPH1Q8WYR4 309 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 KCTD13Q8WZ19 329 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 ARHGEF2Q92974 986 aaKnown RBP11.5□□□□□ -0.57
LRP1-202ENST00000338962 PGBD4Q96DM1 585 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 SYT15Q9BQS2 421 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 PHACTR1Q9C0D0 580 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 MTIF3Q9H2K0 278 aaKnown RBP11.5□□□□□ -0.57
LRP1-202ENST00000338962 UBN1Q9NPG3 1134 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 CTNNAL1Q9UBT7 734 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 GMNCA6NCL1 334 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 ALOX15BO15296 676 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 INPPL1O15357 1258 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 FAM107AO95990 144 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 ZBED1O96006 694 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 POMCP01189 267 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 CYP2F1P24903 491 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 SULT1E1P49888 294 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 ARL4CP56559 192 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 ADCY1Q08828 1119 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 SHHQ15465 462 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 C9orf50Q5SZB4 431 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 KIAA0319Q5VV43 1072 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 MICALCLQ6ZW33 695 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 DEFB106AQ8N104 65 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 PDIK1LQ8N165 341 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 MYCBPAPQ8TBZ2 947 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 FAF2Q96CS3 445 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 PCED1BQ96HM7 432 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 CCT8L2Q96SF2 557 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 PAAF1Q9BRP4 392 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 ADAM33Q9BZ11 813 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 UBE2OQ9C0C9 1292 aaKnown RBP11.5□□□□□ -0.57
LRP1-202ENST00000338962 NRDE2Q9H7Z3 1164 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 VPS37BQ9H9H4 285 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 CRTAC1Q9NQ79 661 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 STAP1Q9ULZ2 295 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 PCDHB7Q9Y5E2 793 aa11.5□□□□□ -0.57
LRP1-202ENST00000338962 SCN5AQ14524 2016 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms