RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 HMBSP08397 361 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 IRF1P10914 325 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 SLC2A3P11169 496 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 PDGFRAP16234 1089 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 ABCB4P21439 1286 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 IFNAR2P48551 515 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 HARS2P49590 506 aaKnown RBP12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 GALCP54803 685 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 TBX4P57082 545 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 PFKPQ01813 784 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 FCHO2Q0JRZ9 810 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 GRM2Q14416 872 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 MTF1Q14872 753 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 PDGFRLQ15198 375 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 TRIP4Q15650 581 aaPredicted RBP12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 ZNF77Q15935 545 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 PLEKHA7Q6IQ23 1121 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 SND1Q7KZF4 910 aaKnown RBP eCLIP12.42□□□□□ -0.426e-6■□□□□ 10.4
SPTLC1-202ENST00000337841 UBALD2Q8IYN6 164 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 RXFP2Q8WXD0 754 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 RNF34Q969K3 372 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 PLD4Q96BZ4 506 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 ZNF653Q96CK0 615 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 RSPRY1Q96DX4 576 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 PIWIL1Q96J94 861 aaKnown RBP12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 LRRC3BQ96PB8 259 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 SMOC2Q9H3U7 446 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 FAM204AQ9H8W3 233 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 METTL5Q9NRN9 209 aaKnown RBP12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 DUS2Q9NX74 493 aaKnown RBP12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 MYO1AQ9UBC5 1043 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 TLR6Q9Y2C9 796 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 EPN1Q9Y6I3 576 aaPredicted RBP12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 SCINQ9Y6U3 715 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 M0QYT0 321 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 NRDCO43847 1150 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 STC2O76061 302 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 SRFP11831 508 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 GPD1P21695 349 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 FECHP22830 423 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 SDC4P31431 198 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 RFC1P35251 1148 aaPredicted RBP12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 MAGEA1P43355 309 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 SULT1E1P49888 294 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 ZXDBP98169 803 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 RING1Q06587 406 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 USP4Q13107 963 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 NR1H3Q13133 447 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 MTA1Q13330 715 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 NNTQ13423 1086 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 MAMLD1Q13495 774 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 SLC25A52Q3SY17 297 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 NUGGCQ68CJ6 796 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 ADAM32Q8TC27 787 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 CSGALNACT1Q8TDX6 532 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 OSCP1Q8WVF1 389 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 CTNNBL1Q8WYA6 563 aaPredicted RBP12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 OTUB2Q96DC9 234 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 ZFRQ96KR1 1074 aaKnown RBP12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 NPY6RQ99463 290 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 NOTCH4Q99466 2003 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 CD320Q9NPF0 282 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 SPTLC3Q9NUV7 552 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 DDIT4Q9NX09 232 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 FARP1Q9Y4F1 1045 aaPredicted RBP12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 PAXBP1Q9Y5B6 917 aa12.41□□□□□ -0.42
SPTLC1-202ENST00000337841 SYNJ2BP-COX16A0A087WUM0 186 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 TCRBV5S1A1TA0A578 114 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 C2CD4BA6NLJ0 364 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 EIF3CLB5ME19 914 aaKnown RBP12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 APOEP02649 317 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 CYP1A2P05177 515 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 FLT3P36888 993 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 SLC11A2P49281 568 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 NUBP1P53384 320 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 DEUP1Q05D60 604 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 NME3Q13232 169 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 TAC4Q86UU9 113 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 DNAAF5Q86Y56 855 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 ADGRG2Q8IZP9 1017 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 EMC1Q8N766 993 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 JOSD2Q8TAC2 188 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 NT5C3BQ969T7 300 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 AZIN2Q96A70 460 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 EIF3CQ99613 913 aaKnown RBP12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 DDX50Q9BQ39 737 aaKnown RBP12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 FAM83CQ9BQN1 747 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 THAP2Q9H0W7 228 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 LINC00597Q9H2U6 94 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 TRPV5Q9NQA5 729 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 SLC2A4RGQ9NR83 387 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 COX16Q9P0S2 106 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 INTUQ9ULD6 942 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 NENFQ9UMX5 172 aa12.4□□□□□ -0.42
SPTLC1-202ENST00000337841 MYH10P35580 1976 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 C2orf16Q68DN1 1984 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 DOCK6Q96HP0 2047 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 TMEM191CA6NGB0 347 aa12.39□□□□□ -0.43
SPTLC1-202ENST00000337841 IRAK2O43187 625 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms