RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 LPIN3Q9BQK8 851 aa16.38■□□□□ 0.21
SMARCD2-202ENST00000323347 LRMDAQ9H2I8 198 aa16.38■□□□□ 0.21
SMARCD2-202ENST00000323347 MANSC1Q9H8J5 431 aa16.38■□□□□ 0.21
SMARCD2-202ENST00000323347 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.38■□□□□ 0.21
SMARCD2-202ENST00000323347 SLC17A7Q9P2U7 560 aa16.38■□□□□ 0.21
SMARCD2-202ENST00000323347 AP4E1Q9UPM8 1137 aa16.38■□□□□ 0.21
SMARCD2-202ENST00000323347 TRAFD1O14545 582 aaPredicted RBP16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 LPXNO60711 386 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 CCDC130P13994 396 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 LMO2P25791 158 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 CCNFP41002 786 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 TAF6P49848 677 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 HIC1Q14526 733 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 SNX17Q15036 470 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 SEPT7Q16181 437 aaKnown RBP16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 SV2CQ496J9 727 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 GLRA4Q5JXX5 417 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 LRRC6Q86X45 466 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 TOP6BLQ8N6T0 577 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 C7orf31Q8N865 590 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 CLEC4CQ8WTT0 213 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 HNRNPABQ99729 332 aaKnown RBP16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 TRIM6Q9C030 488 aaPredicted RBP16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 SNX25Q9H3E2 840 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 ZC3H7BQ9UGR2 993 aaKnown RBP16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 KAT6AQ92794 2004 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 DYNC1LI2O43237 492 aaPredicted RBP16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 PIAS1O75925 651 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 METTL18O95568 372 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 APOEP02649 317 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 KRT16P08779 473 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 SNRPAP09012 282 aaKnown RBP16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 LRPAP1P30533 357 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 MATKP42679 507 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 CDK16Q00536 496 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 GBE1Q04446 702 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 MFSD10Q14728 455 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 MORN1Q5T089 497 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 LGSNQ5TDP6 509 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 FYB2Q5VWT5 728 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 NCBP2-AS2Q69YL0 99 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 BZW1Q7L1Q6 419 aaKnown RBP16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 VPS52Q8N1B4 723 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 APPL2Q8NEU8 664 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 CCDC110Q8TBZ0 833 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 KCTD13Q8WZ19 329 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 MTBPQ96DY7 904 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 TNIP3Q96KP6 325 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 DHX35Q9H5Z1 703 aaKnown RBP16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 XAB2Q9HCS7 855 aaKnown RBP16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 SAR1AQ9NR31 198 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 FZD10Q9ULW2 581 aa16.37■□□□□ 0.21
SMARCD2-202ENST00000323347 SF3B1O75533 1304 aaKnown RBP eCLIP16.36■□□□□ 0.219e-6■■■■■ 68.9
SMARCD2-202ENST00000323347 FAM159BA6NKW6 160 aa16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 HCRTO43612 131 aa16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 KRT37O76014 449 aa16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 T-ENOLP0DO92 83 aa16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 TROVE2P10155 538 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 MLNP12872 115 aa16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 AKAP5P24588 427 aa16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 HOXC8P31273 242 aa16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 MTM1Q13496 603 aa16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 SLC25A52Q3SY17 297 aa16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 PPP6R3Q5H9R7 873 aaPredicted RBP16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 KCNT2Q6UVM3 1135 aa16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 HACE1Q8IYU2 909 aa16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 NME8Q8N427 588 aa16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 TMEM40Q8WWA1 233 aa16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 ERP27Q96DN0 273 aa16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 EBNA1BP2Q99848 306 aaKnown RBP16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 TACO1Q9BSH4 297 aaKnown RBP16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 DTLQ9NZJ0 730 aa16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 KANSL3Q9P2N6 904 aa16.36■□□□□ 0.21
SMARCD2-202ENST00000323347 DAB1O75553 588 aa16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 WFS1O76024 890 aa16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 APRTP07741 180 aa16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 PDGFRBP09619 1106 aa16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 ZNF865P0CJ78 1059 aaPredicted RBP16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 ADORA2BP29275 332 aa16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 PSEN2P49810 448 aa16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 CRYBB1P53674 252 aaPredicted RBP16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 ATXN1P54253 815 aaKnown RBP16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 PRKD1Q15139 912 aaPredicted RBP16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 SPRYD7Q5W111 196 aa16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 STEAP4Q687X5 459 aa16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 UNC5AQ6ZN44 842 aa16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 TIFABQ6ZNK6 161 aa16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 CCDC91Q7Z6B0 441 aa16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 CCDC185Q8N715 623 aa16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 SLC2A14Q8TDB8 520 aa16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 DNAJB3Q8WWF6 145 aa16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 RAB3IPQ96QF0 476 aaPredicted RBP16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 PTPN18Q99952 460 aa16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 DUSP16Q9BY84 665 aa16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 GINS2Q9Y248 185 aa16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 CXorf49A8MYA2 514 aaPredicted RBP16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 GOLGA8RI6L899 631 aa16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 HNRNPCL1O60812 293 aaKnown RBP16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 HSPA1AP0DMV8 641 aaKnown RBP16.35■□□□□ 0.21
SMARCD2-202ENST00000323347 HSPA1BP0DMV9 641 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms