RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 SCNN1BP51168 640 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 HIRAP54198 1017 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 DYNLT1P63172 113 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 PHEXP78562 749 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 MTMR1Q13613 665 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 CCNIQ14094 377 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 ADGRE1Q14246 886 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 RFTN1Q14699 578 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 STILQ15468 1287 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 FNBP1LQ5T0N5 605 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 HIPK4Q8NE63 616 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 GPRASP2Q96D09 838 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 CALN1Q9BXU9 219 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 SDCBP2Q9H190 292 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 CYP4F11Q9HBI6 524 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 TCF7L2Q9NQB0 619 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 TOPORSQ9NS56 1045 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 DDX18Q9NVP1 670 aaKnown RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 UTP6Q9NYH9 597 aaKnown RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 ADAMTS6Q9UKP5 1117 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 A0A0B4J269 797 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 LOC100653049A0A140TA62 436 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 TRIM13O60858 407 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 KRT34O76011 436 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 HADHAP40939 763 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 HSD17B4P51659 736 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 PSMC1P62191 440 aaKnown RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 STX5Q13190 355 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 NCOA4Q13772 614 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 XKR3Q5GH77 459 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 DEPTORQ8TB45 409 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 GCNAQ96QF7 691 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 OSBPL6Q9BZF3 934 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 RBAKQ9NYW8 714 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 WRAP73Q9P2S5 460 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 PCDHB12Q9Y5F1 795 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 FAM170AA1A519 330 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 ENDOD1O94919 500 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 OR6B1O95007 311 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 NCF2P19878 526 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 SLC5A2P31639 672 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 L1CAMP32004 1257 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 ZNF132P52740 706 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 ZPBP2Q6X784 338 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 ZNF354CQ86Y25 554 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 SIAH1Q8IUQ4 282 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 PGAM4Q8N0Y7 254 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 FBXO27Q8NI29 283 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 ZNF420Q8TAQ5 688 aaPredicted RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 CNPY3Q9BT09 278 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 SLC13A1Q9BZW2 595 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 POPDC2Q9HBU9 364 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 TMEM9Q9P0T7 183 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 HSFX1Q9UBD0 423 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 VTI1BQ9UEU0 232 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 GNEQ9Y223 722 aaKnown RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 ARHGEF37A1IGU5 675 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 BCLAF3A2AJT9 711 aaKnown RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 RGSL1A5PLK6 1076 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 PLSCR1O15162 318 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 HDAC3O15379 428 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 H6PDO95479 791 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 CRTAMO95727 393 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 C4BPAP04003 597 aaKnown RBP4.93□□□□□ -1.62
PTPN13-201ENST00000316707 ITGAXP20702 1163 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 TYK2P29597 1187 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 CRKP46108 304 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 SLC1A6P48664 564 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 TLR1Q15399 786 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 TKFCQ3LXA3 575 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 UNC45BQ8IWX7 931 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 AFAP1L2Q8N4X5 818 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 CNTD1Q8N815 330 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 CNKSR2Q8WXI2 1034 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 THAP11Q96EK4 314 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 FADS3Q9Y5Q0 445 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 NUMBLQ9Y6R0 609 aa4.93□□□□□ -1.62
PTPN13-201ENST00000316707 PRPSAP2O60256 369 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 BCAS2O75934 225 aaPredicted RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 CD48P09326 243 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 ATP6V1B1P15313 513 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 SPRP35270 261 aaPredicted RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 INHBCP55103 352 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 EFTUD2Q15029 972 aaKnown RBP eCLIP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 ZNF829Q3KNS6 432 aaPredicted RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 N4BP2L1Q5TBK1 243 aaPredicted RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 MBLAC2Q68D91 279 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 GPAT2Q6NUI2 795 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 DENND5BQ6ZUT9 1274 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 LPCAT2Q7L5N7 544 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 ANKRD23Q86SG2 305 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 HPS6Q86YV9 775 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 BRSK2Q8IWQ3 736 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 CNDP1Q96KN2 507 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 PI4K2AQ9BTU6 479 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 ILKAPQ9H0C8 392 aaPredicted RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 UPF3AQ9H1J1 476 aaKnown RBP4.92□□□□□ -1.62
PTPN13-201ENST00000316707 KLHL11Q9NVR0 708 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 SERPINA10Q9UK55 444 aa4.92□□□□□ -1.62
PTPN13-201ENST00000316707 CTDP1Q9Y5B0 961 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms