RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 GSDMCQ9BYG8 508 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 PVALEFA0A1B0GWK0 134 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 BIRC5O15392 142 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 BTBD8Q5XKL5 378 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 ZNF613Q6PF04 617 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 GATAD2AQ86YP4 633 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 C12orf4Q9NQ89 552 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 UCKL1Q9NWZ5 548 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 SIK3Q9Y2K2 1263 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 ITSN1Q15811 1721 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 SCGNO76038 276 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 OCLNQ16625 522 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 STOX1Q6ZVD7 989 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 PROX1Q92786 737 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 SLC25A13Q9UJS0 675 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 ATP6V1C1P21283 382 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 S100A1P23297 94 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 ZDHHC13Q8IUH4 622 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 ARHGEF19Q8IW93 802 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 ELMO1Q92556 727 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 FAR2Q96K12 515 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 TUFT1Q9NNX1 390 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 MLXQ9UH92 298 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 CLEC4AQ9UMR7 237 aa8.97□□□□□ -0.97
USF3-201ENST00000316407 CCDC162PA2VCL2 907 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 SNAP23O00161 211 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 CYP2E1P05181 493 aaPredicted RBP8.96□□□□□ -0.97
USF3-201ENST00000316407 ITGA4P13612 1032 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 HOXA7P31268 230 aaPredicted RBP8.96□□□□□ -0.97
USF3-201ENST00000316407 FOLH1Q04609 750 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 FASTKD5Q7L8L6 764 aaKnown RBP8.96□□□□□ -0.97
USF3-201ENST00000316407 ELMOD1Q8N336 334 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 TRMT6Q9UJA5 497 aaKnown RBP8.96□□□□□ -0.97
USF3-201ENST00000316407 EIF3LQ9Y262 564 aaKnown RBP8.96□□□□□ -0.97
USF3-201ENST00000316407 PIAS1O75925 651 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 FYNP06241 537 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 ANPEPP15144 967 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 CWF19L1Q69YN2 538 aaKnown RBP8.96□□□□□ -0.97
USF3-201ENST00000316407 FBXO28Q9NVF7 368 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 OR6B1O95007 311 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 NCK1P16333 377 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 FASTKQ14296 549 aaKnown RBP8.96□□□□□ -0.97
USF3-201ENST00000316407 NT5DC3Q86UY8 548 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 UBA3Q8TBC4 463 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 ZSWIM1Q9BR11 485 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 ITGA9Q13797 1035 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 ZHX1-C8orf76Q96EF9 292 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 STRBPQ96SI9 672 aaKnown RBP8.96□□□□□ -0.97
USF3-201ENST00000316407 RMND5AQ9H871 391 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 ZNF609O15014 1411 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 MICALL2Q8IY33 904 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 BLOC1S5Q8TDH9 187 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 SLC20A1Q8WUM9 679 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 CMTM6Q9NX76 183 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 DOLKQ9UPQ8 538 aa8.96□□□□□ -0.97
USF3-201ENST00000316407 PTGER2P43116 358 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 RBBP4Q09028 425 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 SVOPQ8N4V2 548 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 FAM120BQ96EK7 910 aaKnown RBP8.96□□□□□ -0.98
USF3-201ENST00000316407 LACRTQ9GZZ8 138 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 ARMC7Q9H6L4 198 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 NUP50Q9UKX7 468 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 SHBGP04278 402 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 SLC20A2Q08357 652 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 AMIGO2Q86SJ2 522 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 ART5Q96L15 291 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 LIN7AO14910 233 aaPredicted RBP8.96□□□□□ -0.98
USF3-201ENST00000316407 STAU1O95793 577 aaKnown RBP8.96□□□□□ -0.98
USF3-201ENST00000316407 PTK6Q13882 451 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 PODNQ7Z5L7 613 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 RGS18Q9NS28 235 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 TOPORSQ9NS56 1045 aaPredicted RBP8.96□□□□□ -0.98
USF3-201ENST00000316407 STOML2Q9UJZ1 356 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 ING4Q9UNL4 249 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 WARSP23381 471 aaKnown RBP8.96□□□□□ -0.98
USF3-201ENST00000316407 ARHGAP36Q6ZRI8 547 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 ENOSF1Q7L5Y1 443 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 ING3Q9NXR8 418 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 PLA2G4CQ9UP65 541 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 SPHKAPQ2M3C7 1700 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 GRIN2AQ12879 1464 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 A0A1W2PQ72 361 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 GRIA3P42263 894 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 GPAT2Q6NUI2 795 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 PMF1Q6P1K2 205 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 CEP41Q9BYV8 373 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 GPR63Q9BZJ6 419 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 TPRKBQ9Y3C4 175 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 NCAPD2Q15021 1401 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 MYMKA6NI61 221 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 NOS1APO75052 506 aaPredicted RBP8.96□□□□□ -0.98
USF3-201ENST00000316407 NCOA4Q13772 614 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 RNF149Q8NC42 400 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 AENQ8WTP8 325 aaKnown RBP8.96□□□□□ -0.98
USF3-201ENST00000316407 ELMO3Q96BJ8 720 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 PHF12Q96QT6 1004 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 ACOX2Q99424 681 aa8.96□□□□□ -0.98
USF3-201ENST00000316407 RAVER2Q9HCJ3 691 aaKnown RBP8.96□□□□□ -0.98
USF3-201ENST00000316407 SSU72P8A0A1W2PR75 194 aa8.95□□□□□ -0.98
USF3-201ENST00000316407 CCNKO75909 580 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms