RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 FKBP6O75344 327 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 STK10O94804 968 aaKnown RBP13.91□□□□□ -0.18
SKA3-202ENST00000314759 SRGAP2CP0DJJ0 459 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 MSLNQ13421 630 aaPredicted RBP13.91□□□□□ -0.18
SKA3-202ENST00000314759 TTLL12Q14166 644 aaPredicted RBP13.91□□□□□ -0.18
SKA3-202ENST00000314759 TMEM132BQ14DG7 1078 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 ISLR2Q6UXK2 745 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 ST13P4Q8IZP2 240 aaPredicted RBP13.91□□□□□ -0.18
SKA3-202ENST00000314759 MPP5Q8N3R9 675 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 PIWIL1Q96J94 861 aaKnown RBP13.91□□□□□ -0.18
SKA3-202ENST00000314759 KLC2Q9H0B6 622 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 GALNT8Q9NY28 637 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 MAD1L1Q9Y6D9 718 aa13.91□□□□□ -0.18
SKA3-202ENST00000314759 IGKV6D-21A0A0A0MT36 114 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 ARHGAP42A6NI28 874 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 FAM159BA6NKW6 160 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 ITM2AO43736 263 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 LYPLA1O75608 230 aaPredicted RBP13.9□□□□□ -0.18
SKA3-202ENST00000314759 HMGCRP04035 888 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 ATP5BP06576 529 aaKnown RBP13.9□□□□□ -0.18
SKA3-202ENST00000314759 GPD2P43304 727 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 MAGEA6P43360 314 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 HNRNPDQ14103 355 aaKnown RBP13.9□□□□□ -0.18
SKA3-202ENST00000314759 HIC1Q14526 733 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 MYBPC3Q14896 1274 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 CDO1Q16878 200 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 RALGPS1Q5JS13 557 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 ZNF534Q76KX8 674 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 ARCQ7LC44 396 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 ADGRG6Q86SQ4 1221 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 TRIM74Q86UV6 250 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 TRIM73Q86UV7 250 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 SPATA24Q86W54 205 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 PDSS2Q86YH6 399 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 PQLC3Q8N755 202 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 POU5F2Q8N7G0 328 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 OR6Y1Q8NGX8 325 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 FAM172AQ8WUF8 416 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 RXFP2Q8WXD0 754 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 SIGLEC10Q96LC7 697 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 BCO2Q9BYV7 579 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 ELOVL4Q9GZR5 314 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 ZBED1O96006 694 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 TNNC2P02585 160 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 PABPC4LP0CB38 370 aaKnown RBP13.9□□□□□ -0.18
SKA3-202ENST00000314759 PDGFRAP16234 1089 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 EFNA5P52803 228 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 USP46P62068 366 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 CNTN2Q02246 1040 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 PTPN11Q06124 597 aaPredicted RBP13.9□□□□□ -0.18
SKA3-202ENST00000314759 DLG1Q12959 904 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 SURF1Q15526 300 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 FASTKD1Q53R41 847 aaKnown RBP13.9□□□□□ -0.18
SKA3-202ENST00000314759 EFHC1Q5JVL4 640 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 RABGAP1LQ5R372 815 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 AAGABQ6PD74 315 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 TTLL6Q8N841 843 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 USP6NLQ92738 828 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 CNPY3Q9BT09 278 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 SMYD3Q9H7B4 428 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 GPATCH2LQ9NWQ4 482 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 SIX4Q9UIU6 781 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 SORCS3Q9UPU3 1222 aa13.9□□□□□ -0.18
SKA3-202ENST00000314759 C2CD4BA6NLJ0 364 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 M0QYV0 167 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 PDLIM1O00151 329 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 GRAP2O75791 330 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 VAV1P15498 845 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 GPD1P21695 349 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 MAGEA3P43357 314 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 AQP4P55087 323 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 KRT81Q14533 505 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 C16orf46Q6P387 395 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 ACAD11Q709F0 780 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 DHDDSQ86SQ9 333 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 CDR2LQ86X02 465 aaPredicted RBP13.89□□□□□ -0.19
SKA3-202ENST00000314759 GSDMBQ8TAX9 411 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 UBA3Q8TBC4 463 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 ANKRD36BP1Q96IX9 119 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 DNAJC1Q96KC8 554 aaKnown RBP13.89□□□□□ -0.19
SKA3-202ENST00000314759 HSFX1Q9UBD0 423 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 ADAMTS6Q9UKP5 1117 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 PRPSAP2O60256 369 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 MAFO75444 373 aaPredicted RBP13.89□□□□□ -0.19
SKA3-202ENST00000314759 METTL18O95568 372 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 PRKCBP05771 671 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 BACE1P56817 501 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 BCAR1P56945 870 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 ZNF667Q5HYK9 610 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 MBLAC2Q68D91 279 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 DPY19L2Q6NUT2 758 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 ILDR2Q71H61 639 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 RNF149Q8NC42 400 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 MCUQ8NE86 351 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 PIWIL2Q8TC59 973 aaKnown RBP13.89□□□□□ -0.19
SKA3-202ENST00000314759 LRRC39Q96DD0 335 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 HIC2Q96JB3 615 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 EBNA1BP2Q99848 306 aaKnown RBP13.89□□□□□ -0.19
SKA3-202ENST00000314759 CCDC28BQ9BUN5 200 aa13.89□□□□□ -0.19
SKA3-202ENST00000314759 DNAJC16Q9Y2G8 782 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms