RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 CELF2O95319 508 aaKnown RBP11.96□□□□□ -0.49
PTPN2-201ENST00000309660 KITP10721 976 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 EZRP15311 586 aaKnown RBP11.96□□□□□ -0.49
PTPN2-201ENST00000309660 GRB14Q14449 540 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 PWP2Q15269 919 aaKnown RBP11.96□□□□□ -0.49
PTPN2-201ENST00000309660 GALNTL6Q49A17 601 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 PAN2Q504Q3 1202 aaKnown RBP11.96□□□□□ -0.49
PTPN2-201ENST00000309660 TAF1BQ53T94 588 aaPredicted RBP11.96□□□□□ -0.49
PTPN2-201ENST00000309660 RNF43Q68DV7 783 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 LRRC52Q8N7C0 313 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 BANPQ8N9N5 519 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 ARMC2Q8NEN0 867 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 GTF3C2Q8WUA4 911 aaPredicted RBP11.96□□□□□ -0.49
PTPN2-201ENST00000309660 SLC44A1Q8WWI5 657 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 EMID1Q96A84 441 aaPredicted RBP11.96□□□□□ -0.49
PTPN2-201ENST00000309660 PARK7Q99497 189 aaKnown RBP11.96□□□□□ -0.49
PTPN2-201ENST00000309660 ZNF670Q9BS34 389 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 TSSK1BQ9BXA7 367 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 PPCSQ9HAB8 311 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 SLC5A4Q9NY91 659 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 IL1RAPL1Q9NZN1 696 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 GLTPD2A6NH11 291 aa11.96□□□□□ -0.5
PTPN2-201ENST00000309660 M0QYT0 321 aa11.96□□□□□ -0.5
PTPN2-201ENST00000309660 TOP3BO95985 862 aaKnown RBP11.96□□□□□ -0.5
PTPN2-201ENST00000309660 MAP3K7CLP57077 242 aa11.96□□□□□ -0.5
PTPN2-201ENST00000309660 WSCD1Q658N2 575 aa11.96□□□□□ -0.5
PTPN2-201ENST00000309660 CAND1Q86VP6 1230 aaKnown RBP11.96□□□□□ -0.5
PTPN2-201ENST00000309660 SLC26A11Q86WA9 606 aa11.96□□□□□ -0.5
PTPN2-201ENST00000309660 SIX6OS1Q8N1H7 587 aa11.96□□□□□ -0.5
PTPN2-201ENST00000309660 ZNF560Q96MR9 790 aa11.96□□□□□ -0.5
PTPN2-201ENST00000309660 AGAP3Q96P47 875 aa11.96□□□□□ -0.5
PTPN2-201ENST00000309660 PGLYRP2Q96PD5 576 aa11.96□□□□□ -0.5
PTPN2-201ENST00000309660 ZFP69BQ9UJL9 534 aa11.96□□□□□ -0.5
PTPN2-201ENST00000309660 RBM47A0AV96 593 aaKnown RBP11.95□□□□□ -0.5
PTPN2-201ENST00000309660 CFAP69A5D8W1 941 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 KRT37O76014 449 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 BEST1O76090 585 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 CD4P01730 458 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 SETSIPP0DME0 302 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 CDHR3Q6ZTQ4 885 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 PDCD7Q8N8D1 485 aaKnown RBP11.95□□□□□ -0.5
PTPN2-201ENST00000309660 ARRDC4Q8NCT1 418 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 DEPDC1BQ8WUY9 529 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 IQCA1LA6NCM1 817 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 KCNK1O00180 336 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 DCTN3O75935 186 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 UNC5CO95185 931 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 IFRD2Q12894 506 aaPredicted RBP11.95□□□□□ -0.5
PTPN2-201ENST00000309660 SLC45A4Q5BKX6 768 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 MDH1BQ5I0G3 518 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 SLC9A4Q6AI14 798 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 CES3Q6UWW8 571 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 UNC5AQ6ZN44 842 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 UNC93AQ86WB7 457 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 GPATCH11Q8N954 259 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 B3GALNT2Q8NCR0 500 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 SRPK1Q96SB4 655 aaKnown RBP11.95□□□□□ -0.5
PTPN2-201ENST00000309660 TXLNGQ9NUQ3 528 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 DTLQ9NZJ0 730 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 IPPQ9Y573 584 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 SMAPO00193 183 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 CYB561D2O14569 222 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 MDM4O15151 490 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 STAU1O95793 577 aaKnown RBP11.95□□□□□ -0.5
PTPN2-201ENST00000309660 CSH1P0DML2 217 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 CSH2P0DML3 217 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 ZBTB6Q15916 424 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 PLEKHG4Q58EX7 1191 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 SLC26A9Q7LBE3 791 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 TP53INP2Q8IXH6 220 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 AGAP11Q8TF27 550 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 TEKT4Q8WW24 435 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 STAMBPL1Q96FJ0 436 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 L3MBTL3Q96JM7 780 aaPredicted RBP11.95□□□□□ -0.5
PTPN2-201ENST00000309660 TNIP3Q96KP6 325 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 TRIM55Q9BYV6 548 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 POPDC2Q9HBU9 364 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 FBXO6Q9NRD1 293 aaPredicted RBP11.95□□□□□ -0.5
PTPN2-201ENST00000309660 SMYD2Q9NRG4 433 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 FLRT1Q9NZU1 646 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 SBF1O95248 1867 aa11.95□□□□□ -0.5
PTPN2-201ENST00000309660 SLC15A5A6NIM6 579 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 DPYSL4O14531 572 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 XPOTO43592 962 aaKnown RBP11.94□□□□□ -0.5
PTPN2-201ENST00000309660 F2P00734 622 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 PSEN2P49810 448 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 AFF1P51825 1210 aaKnown RBP11.94□□□□□ -0.5
PTPN2-201ENST00000309660 LILRA4P59901 499 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 SYPL2Q5VXT5 272 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 OSTM1Q86WC4 334 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 MZB1Q8WU39 189 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 LPPQ93052 612 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 ALKBH8Q96BT7 664 aaKnown RBP11.94□□□□□ -0.5
PTPN2-201ENST00000309660 ATXN7L3BQ96GX2 97 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 APOPT1Q96IL0 206 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 AP5M1Q9H0R1 490 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 HEY2Q9UBP5 337 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 TTLL3Q9Y4R7 772 aa11.94□□□□□ -0.5
PTPN2-201ENST00000309660 BCLAF3A2AJT9 711 aaKnown RBP11.94□□□□□ -0.5
PTPN2-201ENST00000309660 WDR27A2RRH5 827 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms