RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 OGDHLQ9ULD0 1010 aa23.33■■□□□ 1.33
PDLIM2-202ENST00000308354 FBXO21O94952 628 aa23.33■■□□□ 1.33
PDLIM2-202ENST00000308354 AGTP01019 485 aa23.33■■□□□ 1.33
PDLIM2-202ENST00000308354 ZCCHC9Q8N567 271 aaKnown RBP23.33■■□□□ 1.33
PDLIM2-202ENST00000308354 SCAMP5Q8TAC9 235 aa23.33■■□□□ 1.33
PDLIM2-202ENST00000308354 ZNF670Q9BS34 389 aa23.33■■□□□ 1.33
PDLIM2-202ENST00000308354 FRMD8P1Q9BZ68 369 aaPredicted RBP23.33■■□□□ 1.33
PDLIM2-202ENST00000308354 TPX2Q9ULW0 747 aaKnown RBP23.33■■□□□ 1.33
PDLIM2-202ENST00000308354 STAP1Q9ULZ2 295 aa23.33■■□□□ 1.33
PDLIM2-202ENST00000308354 E7EVH7 732 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 H7C0C1 242 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 TADA2AO75478 443 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 TYMPP19971 482 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 ATP5OP48047 213 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 DEUP1Q05D60 604 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 BHLHA9Q7RTU4 235 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 CEP57Q86XR8 500 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 SEPT8Q92599 483 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 C9orf72Q96LT7 481 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 RBM15Q96T37 977 aaKnown RBP eCLIP23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 NRDE2Q9H7Z3 1164 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 DMAP1Q9NPF5 467 aaPredicted RBP23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 PITPNM1O00562 1244 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 GOT1P17174 413 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 RPL22P35268 128 aaKnown RBP23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 PBX3P40426 434 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 ROR1Q01973 937 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 SLC39A12Q504Y0 691 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 SLC9A4Q6AI14 798 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 MFSD5Q6N075 450 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 NLRP14Q86W24 1093 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 ROPN1BQ9BZX4 212 aaPredicted RBP23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 CNOT10Q9H9A5 744 aaKnown RBP23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 ROPN1Q9HAT0 212 aaPredicted RBP23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 FZD10Q9ULW2 581 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 MFHAS1Q9Y4C4 1052 aa23.32■■□□□ 1.32
PDLIM2-202ENST00000308354 GOLGA8MH3BSY2 632 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 CAPN15O75808 1086 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 LTFP02788 710 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 RDXP35241 583 aaKnown RBP23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 CCDC38Q502W7 563 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 TNFAIP8L3Q5GJ75 292 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 HP1BP3Q5SSJ5 553 aaPredicted RBP23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 DEFB128Q7Z7B8 93 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 SPATA2LQ8IUW3 424 aaPredicted RBP23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 STKLD1Q8NE28 680 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 CASD1Q96PB1 797 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 CSPG4P5Q96PW8 444 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 SELENOSQ9BQE4 189 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 HIPK3Q9H422 1215 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 LRFN2Q9ULH4 789 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 AMPD1P23109 780 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 MMP13P45452 471 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 GBE1Q04446 702 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 GAD2Q05329 585 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 BNIPLQ7Z465 357 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 FAF2Q96CS3 445 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 CCT8L2Q96SF2 557 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 FAM107BQ9H098 131 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 ETNK2Q9NVF9 386 aa23.31■■□□□ 1.32
PDLIM2-202ENST00000308354 SCN5AQ14524 2016 aa23.3■■□□□ 1.32
PDLIM2-202ENST00000308354 NT5C1B-RDH14C9J2C7 533 aa23.3■■□□□ 1.32
PDLIM2-202ENST00000308354 AMHP03971 560 aa23.3■■□□□ 1.32
PDLIM2-202ENST00000308354 PAX3P23760 479 aa23.3■■□□□ 1.32
PDLIM2-202ENST00000308354 CYP2C18P33260 490 aa23.3■■□□□ 1.32
PDLIM2-202ENST00000308354 GRIK1P39086 918 aa23.3■■□□□ 1.32
PDLIM2-202ENST00000308354 CTCFP49711 727 aaPredicted RBP23.3■■□□□ 1.32
PDLIM2-202ENST00000308354 RNASEH2BQ5TBB1 312 aaKnown RBP23.3■■□□□ 1.32
PDLIM2-202ENST00000308354 RELL1Q8IUW5 271 aa23.3■■□□□ 1.32
PDLIM2-202ENST00000308354 NETO2Q8NC67 525 aa23.3■■□□□ 1.32
PDLIM2-202ENST00000308354 ANLNQ9NQW6 1124 aa23.3■■□□□ 1.32
PDLIM2-202ENST00000308354 ABI2Q9NYB9 513 aaPredicted RBP23.3■■□□□ 1.32
PDLIM2-202ENST00000308354 CTNNAL1Q9UBT7 734 aa23.3■■□□□ 1.32
PDLIM2-202ENST00000308354 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 EBAG9O00559 213 aa23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 TRAPPC3O43617 180 aa23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 SLC10A2Q12908 348 aaPredicted RBP23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 MAPRE1Q15691 268 aaKnown RBP23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 SYCP2LQ5T4T6 812 aa23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 STMN4Q9H169 189 aaPredicted RBP23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 ELAC1Q9H777 363 aaKnown RBP23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 RRP15Q9Y3B9 282 aaKnown RBP23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 ARHGEF37A1IGU5 675 aa23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 SRRM3A6NNA2 597 aaPredicted RBP23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 TGM2P21980 687 aa23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 MAGEA4P43358 317 aa23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 MTM1Q13496 603 aa23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 ANKRD22Q5VYY1 191 aa23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 SLC39A5Q6ZMH5 540 aa23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 SRLQ86TD4 932 aa23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 ZNF473Q8WTR7 871 aaKnown RBP23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 SEZ6LQ9BYH1 1024 aa23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 GPR62Q9BZJ7 368 aa23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 SAYSD1Q9NPB0 183 aa23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 DDIT4Q9NX09 232 aa23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 PCDH10Q9P2E7 1040 aa23.29■■□□□ 1.32
PDLIM2-202ENST00000308354 TMEM189-UBE2V1I3L0A0 370 aa23.28■■□□□ 1.32
PDLIM2-202ENST00000308354 I6L893 689 aaPredicted RBP23.28■■□□□ 1.32
PDLIM2-202ENST00000308354 CREB3O43889 395 aa23.28■■□□□ 1.32
PDLIM2-202ENST00000308354 FAM107AO95990 144 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms