RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 MRPS22P82650 360 aaKnown RBP16.77■□□□□ 0.28
CCDC8-201ENST00000307522 EML3Q32P44 896 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 TAS1R3Q7RTX0 852 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 SLCO2A1Q92959 643 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 ATP6V0A1Q93050 837 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 CIDEBQ9UHD4 219 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 TMEM247A6NEH6 219 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 I3L4J1 428 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 UGT1A9O60656 530 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 DNAJA2O60884 412 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 NCF2P19878 526 aaPredicted RBP16.77■□□□□ 0.28
CCDC8-201ENST00000307522 YWHAGP61981 247 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCDC8-201ENST00000307522 SULT2A1Q06520 285 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 KRT81Q14533 505 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 SCARA5Q6ZMJ2 495 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 THNSL1Q8IYQ7 743 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCDC8-201ENST00000307522 SMYD1Q8NB12 490 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 FAM81BQ96LP2 452 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 COPS7BQ9H9Q2 264 aaPredicted RBP16.77■□□□□ 0.28
CCDC8-201ENST00000307522 UGT1A7Q9HAW7 530 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 UGT1A10Q9HAW8 530 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 UGT1A8Q9HAW9 530 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 IFT122Q9HBG6 1241 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 IKBKGQ9Y6K9 419 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 PTPRJQ12913 1337 aa16.77■□□□□ 0.28
CCDC8-201ENST00000307522 TCN1P20061 433 aaPredicted RBP16.77■□□□□ 0.27
CCDC8-201ENST00000307522 FGFR3P22607 806 aa16.77■□□□□ 0.27
CCDC8-201ENST00000307522 CLCN3P51790 818 aa16.77■□□□□ 0.27
CCDC8-201ENST00000307522 HADHBP55084 474 aaKnown RBP16.77■□□□□ 0.27
CCDC8-201ENST00000307522 CDKL1Q00532 357 aa16.77■□□□□ 0.27
CCDC8-201ENST00000307522 HNRNPDQ14103 355 aaKnown RBP16.77■□□□□ 0.27
CCDC8-201ENST00000307522 TMCO4Q5TGY1 634 aa16.77■□□□□ 0.27
CCDC8-201ENST00000307522 MFSD7Q6UXD7 560 aa16.77■□□□□ 0.27
CCDC8-201ENST00000307522 CFAP36Q96G28 342 aa16.77■□□□□ 0.27
CCDC8-201ENST00000307522 TSC22D4Q9Y3Q8 395 aa16.77■□□□□ 0.27
CCDC8-201ENST00000307522 GJA5P36382 358 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 CD97P48960 835 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 LBX2Q6XYB7 198 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 DEPTORQ8TB45 409 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 ZNF398Q8TD17 642 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 HAPLN2Q9GZV7 340 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 VPS11Q9H270 941 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 MAN1C1Q9NR34 630 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 DMAC2Q9NW81 257 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 SENP1Q9P0U3 644 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 SOX13Q9UN79 622 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 DGKIO75912 1065 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 GSTT2P0CG29 244 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 GSTT2BP0CG30 244 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 STIP1P31948 543 aaKnown RBP16.76■□□□□ 0.27
CCDC8-201ENST00000307522 IREB2P48200 963 aaKnown RBP16.76■□□□□ 0.27
CCDC8-201ENST00000307522 KLF1Q13351 362 aaPredicted RBP16.76■□□□□ 0.27
CCDC8-201ENST00000307522 SMTNL2Q2TAL5 461 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 CCDC92Q53HC0 331 aaPredicted RBP16.76■□□□□ 0.27
CCDC8-201ENST00000307522 TMEM214Q6NUQ4 689 aaKnown RBP16.76■□□□□ 0.27
CCDC8-201ENST00000307522 ABHD15Q6UXT9 468 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 SV2AQ7L0J3 742 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 PPM1NQ8N819 430 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 RBM38Q9H0Z9 239 aaKnown RBP16.76■□□□□ 0.27
CCDC8-201ENST00000307522 RBPJLQ9UBG7 517 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 ATAD5Q96QE3 1844 aa16.76■□□□□ 0.27
CCDC8-201ENST00000307522 ABHD2P08910 425 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 CPOXP36551 454 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 SLC5A3P53794 718 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 BASP1P80723 227 aaKnown RBP16.75■□□□□ 0.27
CCDC8-201ENST00000307522 DCAKDQ8WVC6 231 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 POMPQ9Y244 141 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 TRIM49D1C9J1S8 452 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 K7ERI5 159 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 NDC80O14777 642 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 SUPT20HL2P0C7V6 817 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 STAT5BP51692 787 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 PSMD6Q15008 389 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 CCNG2Q16589 344 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 C16orf46Q6P387 395 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 TRIML2Q8N7C3 387 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 DIS3LQ8TF46 1054 aaKnown RBP16.75■□□□□ 0.27
CCDC8-201ENST00000307522 PCYT2Q99447 389 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 TRNAU1APQ9NX07 287 aaKnown RBP16.75■□□□□ 0.27
CCDC8-201ENST00000307522 SEL1LQ9UBV2 794 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 COPEO14579 308 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 CFLARO15519 480 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 B4GALT5O43286 388 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 ZC3H11AO75152 810 aaKnown RBP eCLIP16.75■□□□□ 0.276e-6■□□□□ 11.2
CCDC8-201ENST00000307522 CDH2P19022 906 aaPredicted RBP16.75■□□□□ 0.27
CCDC8-201ENST00000307522 ZNF410Q86VK4 478 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 PPP1R14CQ8TAE6 165 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 SLC7A3Q8WY07 619 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 PAIP1Q9H074 479 aaKnown RBP16.75■□□□□ 0.27
CCDC8-201ENST00000307522 SEMA6AQ9H2E6 1030 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 CAAP1Q9H8G2 361 aa16.75■□□□□ 0.27
CCDC8-201ENST00000307522 SPATA31C2B4DYI2 1134 aa16.74■□□□□ 0.27
CCDC8-201ENST00000307522 FBP2O00757 339 aa16.74■□□□□ 0.27
CCDC8-201ENST00000307522 ATP2A1O14983 1001 aa16.74■□□□□ 0.27
CCDC8-201ENST00000307522 ADAM23O75077 832 aa16.74■□□□□ 0.27
CCDC8-201ENST00000307522 FKBP6O75344 327 aa16.74■□□□□ 0.27
CCDC8-201ENST00000307522 MAP3K6O95382 1288 aa16.74■□□□□ 0.27
CCDC8-201ENST00000307522 ZNF286BP0CG31 522 aa16.74■□□□□ 0.27
CCDC8-201ENST00000307522 DNAL1Q4LDG9 190 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms