RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 EPS8L1Q8TE68 723 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 ERLEC1Q96DZ1 483 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 ATXN7L3BQ96GX2 97 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 PPP1R16AQ96I34 528 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 TRAIPQ9BWF2 469 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 FLRT1Q9NZU1 646 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 ARHGAP20Q9P2F6 1191 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 TPX2Q9ULW0 747 aaKnown RBP9.56□□□□□ -0.88
PTPRE-202ENST00000306042 ADAMTS3O15072 1205 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 TYK2P29597 1187 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 TPGS2Q68CL5 300 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 FBXL19Q6PCT2 694 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 ADCK2Q7Z695 626 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 C2orf15Q8WU43 125 aaKnown RBP9.56□□□□□ -0.88
PTPRE-202ENST00000306042 SHC3Q92529 594 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 FGFBP2Q9BYJ0 223 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 FRMD8P1Q9BZ68 369 aaPredicted RBP9.56□□□□□ -0.88
PTPRE-202ENST00000306042 MINDY3Q9H8M7 445 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.56□□□□□ -0.88
PTPRE-202ENST00000306042 UBA2Q9UBT2 640 aaPredicted RBP9.56□□□□□ -0.88
PTPRE-202ENST00000306042 OR12D3Q9UGF7 316 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 ZC3H7BQ9UGR2 993 aaKnown RBP9.56□□□□□ -0.88
PTPRE-202ENST00000306042 ZMYM5Q9UJ78 669 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 A0A087WUV0 522 aaPredicted RBP9.56□□□□□ -0.88
PTPRE-202ENST00000306042 M0R2N6 131 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 ENPP3O14638 875 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 FGF18O76093 207 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 TIMP1P01033 207 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 IRAK1BP1Q5VVH5 260 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 EMBQ6PCB8 327 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 SPATA4Q8NEY3 305 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 CENPKQ9BS16 269 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 NFKBIZQ9BYH8 718 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 OSGEPQ9NPF4 335 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 TTI1O43156 1089 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 POLBP06746 335 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 RGS4P49798 205 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 MRPS5P82675 430 aaKnown RBP9.55□□□□□ -0.88
PTPRE-202ENST00000306042 FAM187BQ17R55 369 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 GKAP1Q5VSY0 366 aaPredicted RBP9.55□□□□□ -0.88
PTPRE-202ENST00000306042 FOXR2Q6PJQ5 311 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 FAM183BPQ6ZVS7 135 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 OOSP2Q86WS3 158 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 SLC13A5Q86YT5 568 aaPredicted RBP9.55□□□□□ -0.88
PTPRE-202ENST00000306042 EXD1Q8NHP7 514 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 AUTS2Q8WXX7 1259 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 CASP10Q92851 521 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 MS4A14Q96JA4 679 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 C1QTNF7Q9BXJ2 289 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 ZFP14Q9HCL3 533 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 INTS9Q9NV88 658 aaKnown RBP9.55□□□□□ -0.88
PTPRE-202ENST00000306042 DEC1Q9P2X7 70 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 PHF24Q9UPV7 400 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 MRPL42Q9Y6G3 142 aaKnown RBP9.55□□□□□ -0.88
PTPRE-202ENST00000306042 ESYT3A0FGR9 886 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 SMAPO00193 183 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 ESRRBO95718 433 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 CST3P01034 146 aaPredicted RBP9.55□□□□□ -0.88
PTPRE-202ENST00000306042 PYGLP06737 847 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 NRIP1P48552 1158 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 COPS2P61201 443 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 ADCY2Q08462 1091 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 SPIRE1Q08AE8 756 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 PEX6Q13608 980 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 KCTD16Q68DU8 428 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 SPOCD1Q6ZMY3 1216 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 ANKMY2Q8IV38 441 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 FAM71AQ8IYT1 594 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 CFAP61Q8NHU2 1237 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 RNF39Q9H2S5 420 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 ACP6Q9NPH0 428 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 AVENQ9NQS1 362 aaPredicted RBP9.55□□□□□ -0.88
PTPRE-202ENST00000306042 L1RE1Q9UN81 338 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 VPS9D1Q9Y2B5 631 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 PDE4DIPQ5VU43 2346 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 CALCAP01258 141 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 ATP1A2P50993 1020 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 POLR2LP62875 67 aaKnown RBP9.55□□□□□ -0.88
PTPRE-202ENST00000306042 OTUD4Q01804 1114 aaKnown RBP9.55□□□□□ -0.88
PTPRE-202ENST00000306042 POU5F1Q01860 360 aaKnown RBP9.55□□□□□ -0.88
PTPRE-202ENST00000306042 INAVAQ3KP66 663 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 MFSD5Q6N075 450 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 POF1BQ8WVV4 589 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 C20orf96Q9NUD7 363 aaPredicted RBP9.55□□□□□ -0.88
PTPRE-202ENST00000306042 MYH1P12882 1939 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 FGF10O15520 208 aaPredicted RBP9.55□□□□□ -0.88
PTPRE-202ENST00000306042 CIB2O75838 187 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 RGS20O76081 388 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 APODP05090 189 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 BCL2L1Q07817 233 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 STXBP5LQ9Y2K9 1186 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 ADGRA2Q96PE1 1338 aa9.55□□□□□ -0.88
PTPRE-202ENST00000306042 A0A0A6YYK5 440 aaPredicted RBP9.54□□□□□ -0.88
PTPRE-202ENST00000306042 USP27XA6NNY8 438 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 C1QTNF3-AMACRE9PGA6 284 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 CRTAMO95727 393 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 ITGALP20701 1170 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 MIPP30301 263 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 SLC5A3P53794 718 aa9.54□□□□□ -0.88
PTPRE-202ENST00000306042 CCZ1BP86790 482 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms