RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 SELENOSQ9BQE4 189 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 POPDC2Q9HBU9 364 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 RGS18Q9NS28 235 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 NR2E3Q9Y5X4 410 aa6.8□□□□□ -1.32
USP47-201ENST00000305481 TDRD15B5MCY1 1934 aaKnown RBP6.8□□□□□ -1.32
USP47-201ENST00000305481 SYNJ2BP-COX16A0A087WUM0 186 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 A0A087WUV0 522 aaPredicted RBP6.79□□□□□ -1.32
USP47-201ENST00000305481 M0QYT0 321 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 INPPL1O15357 1258 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 FAM107AO95990 144 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 DESP17661 470 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 SSTR1P30872 391 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 TUSC3Q13454 348 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 QPCTQ16769 361 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 CEP128Q6ZU80 1094 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 ZNF280BQ86YH2 543 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 SLC43A3Q8NBI5 491 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 NETO2Q8NC67 525 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 ADAM32Q8TC27 787 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 ZNF473Q8WTR7 871 aaKnown RBP6.79□□□□□ -1.32
USP47-201ENST00000305481 TTC25Q96NG3 672 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 ACBD6Q9BR61 282 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 STMN4Q9H169 189 aaPredicted RBP6.79□□□□□ -1.32
USP47-201ENST00000305481 DTLQ9NZJ0 730 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 COX16Q9P0S2 106 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 SQORQ9Y6N5 450 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 C9IYK1 514 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 FAM72CH0Y354 149 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 CDH16O75309 829 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 AVILO75366 819 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 PIAS1O75925 651 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 DDHD2O94830 711 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 ODC1P11926 461 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 YY1P25490 414 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 ARL4CP56559 192 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 NME3Q13232 169 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 INTS6LQ5JSJ4 861 aaKnown RBP6.79□□□□□ -1.32
USP47-201ENST00000305481 CLLU1OSQ5K130 101 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 FAM72AQ5TYM5 149 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 FAM72DQ6L9T8 149 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 FAM72BQ86X60 149 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 PGBD4Q96DM1 585 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 SMARCD1Q96GM5 515 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 ZNF317Q96PQ6 595 aaPredicted RBP6.79□□□□□ -1.32
USP47-201ENST00000305481 PHACTR1Q9C0D0 580 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 WDR6Q9NNW5 1121 aaKnown RBP6.79□□□□□ -1.32
USP47-201ENST00000305481 ARHGEF4Q9NR80 690 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 RAB6BQ9NRW1 208 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 RABGEF1Q9UJ41 708 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 PTCH2Q9Y6C5 1203 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 ZNF638Q14966 1978 aaKnown RBP6.79□□□□□ -1.32
USP47-201ENST00000305481 FRMPD3Q5JV73 1810 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 EXOC1LA0A1B0GW35 172 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 A0A1W2PQ45 241 aaPredicted RBP6.79□□□□□ -1.32
USP47-201ENST00000305481 A0A1W2PQY0 241 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 TMEM120BA0PK00 339 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 MOXD2PA6NHM9 499 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 NDC80O14777 642 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 DGKIO75912 1065 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 TOMM70O94826 608 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 METTL18O95568 372 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 INHAP05111 366 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 BDNFP23560 247 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 PCSK1P29120 753 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 RDXP35241 583 aaKnown RBP6.79□□□□□ -1.32
USP47-201ENST00000305481 SLC45A4Q5BKX6 768 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 FAXCQ5TGI0 409 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 KCNT2Q6UVM3 1135 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 TDRPQ86YL5 185 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 FBXO36Q8NEA4 188 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 CCDC110Q8TBZ0 833 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 RAET1EQ8TD07 263 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 PXYLP1Q8TE99 480 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 GLT1D1Q96MS3 346 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 OLFM3Q96PB7 478 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 VPS37BQ9H9H4 285 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 CNGB3Q9NQW8 809 aa6.79□□□□□ -1.32
USP47-201ENST00000305481 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.79□□□□□ -1.32
USP47-201ENST00000305481 COL4A4P53420 1690 aaPredicted RBP6.78□□□□□ -1.32
USP47-201ENST00000305481 FBXO21O94952 628 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 ZBED1O96006 694 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 HOXD10P28358 340 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 NR2C2P49116 596 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 FAM189BP81408 668 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 CBLBQ13191 982 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 XRCC4Q13426 336 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 EFTUD2Q15029 972 aaKnown RBP eCLIP6.78□□□□□ -1.32
USP47-201ENST00000305481 DCLRE1AQ6PJP8 1040 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 C3orf62Q6ZUJ4 267 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 TAOK1Q7L7X3 1001 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 PSTKQ8IV42 348 aaKnown RBP6.78□□□□□ -1.32
USP47-201ENST00000305481 TP53INP2Q8IXH6 220 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 SLC7A14Q8TBB6 771 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 PYROXD1Q8WU10 500 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 EDEM1Q92611 657 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 SUSD3Q96L08 255 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 QKIQ96PU8 341 aaKnown RBP eCLIP6.78□□□□□ -1.32
USP47-201ENST00000305481 PRMT1Q99873 361 aaKnown RBP6.78□□□□□ -1.32
USP47-201ENST00000305481 FAM107BQ9H098 131 aa6.78□□□□□ -1.32
USP47-201ENST00000305481 INTS9Q9NV88 658 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms