RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 SNRNP27Q8WVK2 155 aaKnown RBP14.32□□□□□ -0.12
PRKCB-201ENST00000303531 CATSPER2Q96P56 530 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 MTIF3Q9H2K0 278 aaKnown RBP14.32□□□□□ -0.12
PRKCB-201ENST00000303531 TCF7L2Q9NQB0 619 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 CHI3L1P36222 383 aaPredicted RBP14.32□□□□□ -0.12
PRKCB-201ENST00000303531 CASP7P55210 303 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 NUP107P57740 925 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 ITGA9Q13797 1035 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 ATXN2LQ8WWM7 1075 aaKnown RBP14.32□□□□□ -0.12
PRKCB-201ENST00000303531 PIH1D1Q9NWS0 290 aaKnown RBP14.32□□□□□ -0.12
PRKCB-201ENST00000303531 DSEQ9UL01 958 aa14.32□□□□□ -0.12
PRKCB-201ENST00000303531 E7ENQ6 273 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 BAIAP3O94812 1187 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 GUCA1CO95843 209 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 SLC16A1P53985 500 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 CNTN1Q12860 1018 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 ADRM1Q16186 407 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 MFSD7Q6UXD7 560 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 ERO1BQ86YB8 467 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 SLC44A2Q8IWA5 706 aaPredicted RBP14.31□□□□□ -0.12
PRKCB-201ENST00000303531 PPP1R10Q96QC0 940 aaKnown RBP14.31□□□□□ -0.12
PRKCB-201ENST00000303531 NDUFA13Q9P0J0 144 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 FRMPD4Q14CM0 1322 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 ERI2A8K979 691 aaKnown RBP14.31□□□□□ -0.12
PRKCB-201ENST00000303531 SMNDC1O75940 238 aaKnown RBP eCLIP14.31□□□□□ -0.12
PRKCB-201ENST00000303531 MLH1P40692 756 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 MEA1Q16626 185 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 TMEM169Q96HH4 297 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 APOPT1Q96IL0 206 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 MICAL2O94851 1124 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 TPH1P17752 444 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 ITGALP20701 1170 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 CAB39Q9Y376 341 aaPredicted RBP14.31□□□□□ -0.12
PRKCB-201ENST00000303531 ADGRA3Q8IWK6 1321 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 SLC12A3P55017 1021 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 ZNF268Q14587 947 aaPredicted RBP14.31□□□□□ -0.12
PRKCB-201ENST00000303531 TRIM16LQ309B1 348 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 DNERQ8NFT8 737 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 EDEM1Q92611 657 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 VCPIP1Q96JH7 1222 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 TBC1D13Q9NVG8 400 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 RBM22Q9NW64 420 aaKnown RBP eCLIP14.31□□□□□ -0.12
PRKCB-201ENST00000303531 USP20Q9Y2K6 914 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 MAP2P11137 1827 aaKnown RBP14.31□□□□□ -0.12
PRKCB-201ENST00000303531 CASTOR2A6NHX0 329 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 LZTS3O60299 673 aaPredicted RBP14.31□□□□□ -0.12
PRKCB-201ENST00000303531 ATP9AO75110 1047 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 NBPF12Q5TAG4 269 aaPredicted RBP14.31□□□□□ -0.12
PRKCB-201ENST00000303531 SLC22A9Q8IVM8 553 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 DDHD1Q8NEL9 900 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 TADA1Q96BN2 335 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 INTS13Q9NVM9 706 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 DDX43Q9NXZ2 648 aaKnown RBP14.31□□□□□ -0.12
PRKCB-201ENST00000303531 C6orf203Q9P0P8 240 aaPredicted RBP14.31□□□□□ -0.12
PRKCB-201ENST00000303531 DNPEPQ9ULA0 475 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 ZBTB49Q6ZSB9 765 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 KYQ8NBH2 561 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 TMEM237Q96Q45 408 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 UBXN6Q9BZV1 441 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 VPS28Q9UK41 221 aa14.31□□□□□ -0.12
PRKCB-201ENST00000303531 MAGEB16A2A368 324 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 RHOCP08134 193 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 SLC15A2Q16348 729 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 PHF21BQ96EK2 531 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 PIF1Q9H611 641 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 RHBDL2Q9NX52 303 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.3□□□□□ -0.12
PRKCB-201ENST00000303531 MEI4A8MW99 385 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 ZNF682O95780 498 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 SERPINE1P05121 402 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 TPBGLP0DKB5 382 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 ALDH6A1Q02252 535 aaKnown RBP14.3□□□□□ -0.12
PRKCB-201ENST00000303531 ADIGQ0VDE8 80 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 PKN2Q16513 984 aaKnown RBP14.3□□□□□ -0.12
PRKCB-201ENST00000303531 CBWD6Q4V339 395 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 CBWD3Q5JTY5 395 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 CBWD5Q5RIA9 395 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 RAD54BQ9Y620 910 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 FCHO1O14526 889 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 CLPTM1O96005 669 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 FCGRTP55899 365 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 RHOAP61586 193 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 HTR3CQ8WXA8 447 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 CAPN10Q9HC96 672 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 TUBGCP4Q9UGJ1 667 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 CNTNAP2Q9UHC6 1331 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 RGS5O15539 181 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 EGFRP00533 1210 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 MGAT1P26572 445 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 GRTP1Q5TC63 336 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 ILDR2Q71H61 639 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 TMPRSS6Q8IU80 811 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 GLMNQ92990 594 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 OXNAD1Q96HP4 312 aaPredicted RBP14.3□□□□□ -0.12
PRKCB-201ENST00000303531 SRPK1Q96SB4 655 aaKnown RBP14.3□□□□□ -0.12
PRKCB-201ENST00000303531 TBCBQ99426 244 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 DNAJC18Q9H819 358 aa14.3□□□□□ -0.12
PRKCB-201ENST00000303531 UTP6Q9NYH9 597 aaKnown RBP14.3□□□□□ -0.12
PRKCB-201ENST00000303531 CPSF4O95639 269 aaKnown RBP14.3□□□□□ -0.12
PRKCB-201ENST00000303531 INSRRP14616 1297 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms