RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 TICAM1Q8IUC6 712 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 C4orf19Q8IY42 314 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 WDTC1Q8N5D0 677 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 FNDC8Q8TC99 324 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 FAF2Q96CS3 445 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 NRDE2Q9H7Z3 1164 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 LIN28AQ9H9Z2 209 aaKnown RBP11.25□□□□□ -0.61
ZNF558-201ENST00000301475 RAB26Q9ULW5 256 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 BBOX1O75936 387 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 GARTP22102 1010 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 COG7P83436 770 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 PPIDQ08752 370 aaKnown RBP11.25□□□□□ -0.61
ZNF558-201ENST00000301475 TKFCQ3LXA3 575 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 ZNF394Q53GI3 561 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 HSP90AA5PQ58FG0 334 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 ZBTB41Q5SVQ8 909 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 LRRC8BQ6P9F7 803 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 CAND1Q86VP6 1230 aaKnown RBP11.25□□□□□ -0.61
ZNF558-201ENST00000301475 LILRA2Q8N149 483 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 PPP1R14CQ8TAE6 165 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 SORT1Q99523 831 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 FRMD8P1Q9BZ68 369 aaPredicted RBP11.25□□□□□ -0.61
ZNF558-201ENST00000301475 RAB6BQ9NRW1 208 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 C6orf203Q9P0P8 240 aaPredicted RBP11.25□□□□□ -0.61
ZNF558-201ENST00000301475 RIMS3Q9UJD0 308 aa11.25□□□□□ -0.61
ZNF558-201ENST00000301475 MRPL11Q9Y3B7 192 aaKnown RBP11.25□□□□□ -0.61
ZNF558-201ENST00000301475 WDR81Q562E7 1941 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 ZNF195O14628 629 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 ZBTB14O43829 449 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 SUPT3HO75486 399 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 CCNE2O96020 404 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 SLC1A6P48664 564 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 MRPS22P82650 360 aaKnown RBP11.24□□□□□ -0.61
ZNF558-201ENST00000301475 MRPS9P82933 396 aaKnown RBP11.24□□□□□ -0.61
ZNF558-201ENST00000301475 GPAT2Q6NUI2 795 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 BORAQ6PGQ7 559 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 ALDH16A1Q8IZ83 802 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 LRRC43Q8N309 656 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 SAMD3Q8N6K7 520 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 EMC1Q8N766 993 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 OR5B17Q8NGF7 314 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 HAPLN2Q9GZV7 340 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 IFT122Q9HBG6 1241 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 FBXO28Q9NVF7 368 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 PCSK1NQ9UHG2 260 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 ARHGAP10A1A4S6 786 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 TMEM221A6NGB7 291 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 DCXO43602 365 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 EXTL3O43909 919 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 KRT38O76015 456 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 APOEP02649 317 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 NCF2P19878 526 aaPredicted RBP11.24□□□□□ -0.61
ZNF558-201ENST00000301475 FUT4P22083 530 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 ROR1Q01973 937 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 MMRN1Q13201 1228 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 ADGRE1Q14246 886 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 ACAP1Q15027 740 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 PDK1Q15118 436 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 UNC5AQ6ZN44 842 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 LDHDQ86WU2 507 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 ZBTB8BQ8NAP8 495 aaPredicted RBP11.24□□□□□ -0.61
ZNF558-201ENST00000301475 ZDHHC15Q96MV8 337 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 CSRNP1Q96S65 589 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 SIKE1Q9BRV8 207 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 NTPCRQ9BSD7 190 aaKnown RBP11.24□□□□□ -0.61
ZNF558-201ENST00000301475 ZC3H12CQ9C0D7 883 aaKnown RBP11.24□□□□□ -0.61
ZNF558-201ENST00000301475 Q9H521 79 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 STN1Q9H668 368 aaKnown RBP11.24□□□□□ -0.61
ZNF558-201ENST00000301475 SLC17A6Q9P2U8 582 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 GNEQ9Y223 722 aaKnown RBP11.24□□□□□ -0.61
ZNF558-201ENST00000301475 SH3GLB1Q9Y371 365 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 AK5Q9Y6K8 562 aa11.24□□□□□ -0.61
ZNF558-201ENST00000301475 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.23□□□□□ -0.61
ZNF558-201ENST00000301475 CHADO15335 359 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 CREB5Q02930 508 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 RARS2Q5T160 578 aaKnown RBP11.23□□□□□ -0.61
ZNF558-201ENST00000301475 PPP1R2P3Q6NXS1 205 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 UBR7Q8N806 425 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 TMIGD2Q96BF3 282 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 PPP1R14BQ96C90 147 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 CMTM5Q96DZ9 223 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 MAML3Q96JK9 1138 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 DBNDD1Q9H9R9 158 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 NRXN2Q9P2S2 1712 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 SLC15A5A6NIM6 579 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 TRPA1O75762 1119 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 KRT7P08729 469 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 FAM58BPP0C7Q3 252 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 COX4I1P13073 169 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 MSX2P35548 267 aaPredicted RBP11.23□□□□□ -0.61
ZNF558-201ENST00000301475 NR1H2P55055 460 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 HDAC4P56524 1084 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 ENPEPQ07075 957 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 PCLAFQ15004 111 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 PTPN20Q4JDL3 420 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 LGSNQ5TDP6 509 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 DARS2Q6PI48 645 aaKnown RBP11.23□□□□□ -0.61
ZNF558-201ENST00000301475 THNSL1Q8IYQ7 743 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 TFAP2BQ92481 460 aa11.23□□□□□ -0.61
ZNF558-201ENST00000301475 HSPH1Q92598 858 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms