RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ZSCAN18Q8TBC5 510 aaPredicted RBP15.16■□□□□ 0.02
COL6A2-201ENST00000300527 SYTL5Q8TDW5 730 aaPredicted RBP15.16■□□□□ 0.02
COL6A2-201ENST00000300527 PGLYRP2Q96PD5 576 aa15.16■□□□□ 0.02
COL6A2-201ENST00000300527 USP29Q9HBJ7 922 aa15.16■□□□□ 0.02
COL6A2-201ENST00000300527 SIRPGQ9P1W8 387 aa15.16■□□□□ 0.02
COL6A2-201ENST00000300527 FETUBQ9UGM5 382 aa15.16■□□□□ 0.02
COL6A2-201ENST00000300527 USP18Q9UMW8 372 aa15.16■□□□□ 0.02
COL6A2-201ENST00000300527 SBF2Q86WG5 1849 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 C3orf70A6NLC5 250 aaPredicted RBP15.15■□□□□ 0.02
COL6A2-201ENST00000300527 POLRMTO00411 1230 aaKnown RBP15.15■□□□□ 0.02
COL6A2-201ENST00000300527 TFAP2AP05549 437 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 PRKCEQ02156 737 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 SLC25A11Q02978 314 aaKnown RBP15.15■□□□□ 0.02
COL6A2-201ENST00000300527 CYLC2Q14093 348 aaPredicted RBP15.15■□□□□ 0.02
COL6A2-201ENST00000300527 KYAT3Q6YP21 454 aaKnown RBP15.15■□□□□ 0.02
COL6A2-201ENST00000300527 C15orf39Q6ZRI6 1047 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 TRIML2Q8N7C3 387 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 UBA3Q8TBC4 463 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 MARK4Q96L34 752 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 OXCT2Q9BYC2 517 aaPredicted RBP15.15■□□□□ 0.02
COL6A2-201ENST00000300527 Q9H521 79 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 ABCA3Q99758 1704 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 A0A0J9YVX5 310 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 APOC4-APOC2K7ER74 178 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 APOEP02649 317 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 APOC2P02655 101 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 FGFR3P22607 806 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 THNSL1Q8IYQ7 743 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 ADGRF2Q8IZF7 708 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 CEP41Q9BYV8 373 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 MYH9P35579 1960 aaKnown RBP15.15■□□□□ 0.02
COL6A2-201ENST00000300527 CRTAMO95727 393 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 ADORA2AP29274 412 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 POLR2BP30876 1174 aaKnown RBP15.15■□□□□ 0.02
COL6A2-201ENST00000300527 JAK3P52333 1124 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 WASHC5Q12768 1159 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 FAM156AQ8NDB6 213 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 CERKQ8TCT0 537 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 TFB1MQ8WVM0 346 aaKnown RBP15.15■□□□□ 0.02
COL6A2-201ENST00000300527 IDI2Q9BXS1 227 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 KLC2Q9H0B6 622 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 SEMA6AQ9H2E6 1030 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 ANKEF1Q9NU02 776 aa15.15■□□□□ 0.02
COL6A2-201ENST00000300527 KLF11O14901 512 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 SMIM18P0DKX4 95 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 BCAR1P56945 870 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 PPIDQ08752 370 aaKnown RBP15.14■□□□□ 0.01
COL6A2-201ENST00000300527 FLOT2Q14254 428 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 PPM1LQ5SGD2 360 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 CMTM5Q96DZ9 223 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 CPXM1Q96SM3 734 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 ADPGKQ9BRR6 497 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 ARHGEF38Q9NXL2 777 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 PTTG2Q9NZH5 202 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 TXNDC16Q9P2K2 825 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 HERC5Q9UII4 1024 aaKnown RBP15.14■□□□□ 0.01
COL6A2-201ENST00000300527 UBIAD1Q9Y5Z9 338 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 TPP1O14773 563 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 HSPA4LO95757 839 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 HMGCRP04035 888 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 IDH3AP50213 366 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 ZNF699Q32M78 642 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 HSP90AA5PQ58FG0 334 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 OR6B2Q6IFH4 312 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 LRRC8BQ6P9F7 803 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 PQLC1Q8N2U9 271 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 PRICKLE1Q96MT3 831 aaPredicted RBP15.14■□□□□ 0.01
COL6A2-201ENST00000300527 CDRT15Q96T59 188 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 POPDC2Q9HBU9 364 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 ADAMTSL1Q8N6G6 1762 aa15.14■□□□□ 0.01
COL6A2-201ENST00000300527 ZSCAN9O15535 394 aaPredicted RBP15.13■□□□□ 0.01
COL6A2-201ENST00000300527 AOC1P19801 751 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 HDAC4P56524 1084 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 KRT76Q01546 638 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 HNRNPDQ14103 355 aaKnown RBP15.13■□□□□ 0.01
COL6A2-201ENST00000300527 RARS2Q5T160 578 aaKnown RBP15.13■□□□□ 0.01
COL6A2-201ENST00000300527 TEDDM1Q5T9Z0 273 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 WDR78Q5VTH9 848 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 SAMD3Q8N6K7 520 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 ATP6V0A1Q93050 837 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 CAAP1Q9H8G2 361 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 CYTH4Q9UIA0 394 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 ZNFX1Q9P2E3 1918 aaKnown RBP15.13■□□□□ 0.01
COL6A2-201ENST00000300527 STX16-NPEPL1H3BU86 382 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 FOXD2O60548 495 aaPredicted RBP15.13■□□□□ 0.01
COL6A2-201ENST00000300527 AMHP03971 560 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 RGS7P49802 495 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 GTF2A2P52657 109 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 PGM5Q15124 567 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 TBCCQ15814 346 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 CCDC60Q8IWA6 550 aaPredicted RBP15.13■□□□□ 0.01
COL6A2-201ENST00000300527 RTKN2Q8IZC4 609 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 FBXW8Q8N3Y1 598 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 CATSPER2Q96P56 530 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 WDR55Q9H6Y2 383 aaPredicted RBP15.13■□□□□ 0.01
COL6A2-201ENST00000300527 DNAJB4Q9UDY4 337 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 ARHGAP26Q9UNA1 814 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 SF3B1O75533 1304 aaKnown RBP eCLIP15.13■□□□□ 0.01
COL6A2-201ENST00000300527 WDR27A2RRH5 827 aa15.13■□□□□ 0.01
COL6A2-201ENST00000300527 CSPG5O95196 566 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms