RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 PCMTD2Q9NV79 361 aa14.09□□□□□ -0.15
CDH8-201ENST00000299345 SMIM28A0A1B0GU29 152 aa14.08□□□□□ -0.15
CDH8-201ENST00000299345 H3BRJ5 948 aa14.08□□□□□ -0.15
CDH8-201ENST00000299345 C2CD2LO14523 706 aa14.08□□□□□ -0.15
CDH8-201ENST00000299345 LDLRAD1Q5T700 205 aa14.08□□□□□ -0.15
CDH8-201ENST00000299345 LONP2Q86WA8 852 aa14.08□□□□□ -0.15
CDH8-201ENST00000299345 NUDCD3Q8IVD9 361 aa14.08□□□□□ -0.15
CDH8-201ENST00000299345 GSDMBQ8TAX9 411 aa14.08□□□□□ -0.15
CDH8-201ENST00000299345 C10orf82Q8WW14 230 aa14.08□□□□□ -0.15
CDH8-201ENST00000299345 STAMBPL1Q96FJ0 436 aa14.08□□□□□ -0.15
CDH8-201ENST00000299345 AP5M1Q9H0R1 490 aa14.08□□□□□ -0.15
CDH8-201ENST00000299345 CCDC195A0A1B0GUA6 201 aa14.08□□□□□ -0.16
CDH8-201ENST00000299345 RBM47A0AV96 593 aaKnown RBP14.08□□□□□ -0.16
CDH8-201ENST00000299345 A8MUI8 341 aa14.08□□□□□ -0.16
CDH8-201ENST00000299345 CYP4V2Q6ZWL3 525 aaPredicted RBP14.08□□□□□ -0.16
CDH8-201ENST00000299345 ATP2A3Q93084 1043 aa14.08□□□□□ -0.16
CDH8-201ENST00000299345 HSFY1Q96LI6 401 aa14.08□□□□□ -0.16
CDH8-201ENST00000299345 CSPG4P5Q96PW8 444 aa14.08□□□□□ -0.16
CDH8-201ENST00000299345 TUBB6Q9BUF5 446 aa14.08□□□□□ -0.16
CDH8-201ENST00000299345 GOLGA2P5Q9HBQ8 144 aa14.08□□□□□ -0.16
CDH8-201ENST00000299345 UTRNP46939 3433 aa14.08□□□□□ -0.16
CDH8-201ENST00000299345 IQCA1LA6NCM1 817 aa14.08□□□□□ -0.16
CDH8-201ENST00000299345 DCAF8L1A6NGE4 600 aa14.08□□□□□ -0.16
CDH8-201ENST00000299345 GOT1P17174 413 aa14.08□□□□□ -0.16
CDH8-201ENST00000299345 L1CAMP32004 1257 aa14.08□□□□□ -0.16
CDH8-201ENST00000299345 PDE1BQ01064 536 aa14.08□□□□□ -0.16
CDH8-201ENST00000299345 ADIGQ0VDE8 80 aa14.08□□□□□ -0.16
CDH8-201ENST00000299345 ZNF398Q8TD17 642 aa14.08□□□□□ -0.16
CDH8-201ENST00000299345 HTR3CQ8WXA8 447 aa14.08□□□□□ -0.16
CDH8-201ENST00000299345 MTO1Q9Y2Z2 717 aaKnown RBP14.08□□□□□ -0.16
CDH8-201ENST00000299345 METTL18O95568 372 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 CCNB1P14635 433 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 IFRD2Q12894 506 aaPredicted RBP14.07□□□□□ -0.16
CDH8-201ENST00000299345 DPYSL2Q16555 572 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 PIGZQ86VD9 579 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 RFWD2Q8NHY2 731 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 RILPQ96NA2 401 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 M0QYT0 321 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 ANP32DO95626 131 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 ACAT1P24752 427 aaKnown RBP14.07□□□□□ -0.16
CDH8-201ENST00000299345 SERPINB9P50453 376 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 SMAD1Q15797 465 aaKnown RBP14.07□□□□□ -0.16
CDH8-201ENST00000299345 MAMDC4Q6UXC1 1216 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 UNC5AQ6ZN44 842 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 PDZD4Q76G19 769 aaPredicted RBP14.07□□□□□ -0.16
CDH8-201ENST00000299345 CCDC185Q8N715 623 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 MCUQ8NE86 351 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 EBNA1BP2Q99848 306 aaKnown RBP14.07□□□□□ -0.16
CDH8-201ENST00000299345 ADAMTS10Q9H324 1103 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 POPDC2Q9HBU9 364 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 TOMM70O94826 608 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 RARBP10826 455 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 ESRRAP11474 423 aaPredicted RBP14.07□□□□□ -0.16
CDH8-201ENST00000299345 AXLP30530 894 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 E2F7Q96AV8 911 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 KCTD15Q96SI1 283 aaPredicted RBP14.07□□□□□ -0.16
CDH8-201ENST00000299345 TMEM120AQ9BXJ8 343 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 LRMDAQ9H2I8 198 aa14.07□□□□□ -0.16
CDH8-201ENST00000299345 SMIM35A0A1B0GVV1 85 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 CLNS1AP54105 237 aaKnown RBP14.06□□□□□ -0.16
CDH8-201ENST00000299345 DEUP1Q05D60 604 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 MFSD10Q14728 455 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 CCDC6Q16204 474 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 PKDCCQ504Y2 493 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 CAND1Q86VP6 1230 aaKnown RBP14.06□□□□□ -0.16
CDH8-201ENST00000299345 PDCD7Q8N8D1 485 aaKnown RBP14.06□□□□□ -0.16
CDH8-201ENST00000299345 BRI3BPQ8WY22 251 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 NDRG1Q92597 394 aaKnown RBP14.06□□□□□ -0.16
CDH8-201ENST00000299345 USP6NLQ92738 828 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 N4BP2L2Q92802 583 aaPredicted RBP14.06□□□□□ -0.16
CDH8-201ENST00000299345 INPP5DQ92835 1189 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 MTBPQ96DY7 904 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 LGMNQ99538 433 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 CEP41Q9BYV8 373 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 TTLL3Q9Y4R7 772 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 SLC15A5A6NIM6 579 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 CXorf49A8MYA2 514 aaPredicted RBP14.06□□□□□ -0.16
CDH8-201ENST00000299345 M0QZ92 97 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 DIAPH2O60879 1101 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 GSTA2P09210 222 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 FDFT1P37268 417 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 MATKP42679 507 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 PCBP1Q15365 356 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDH8-201ENST00000299345 PID1Q7Z2X4 250 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 CRLF3Q8IUI8 442 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 CRYBG2Q8N1P7 616 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 PYROXD2Q8N2H3 581 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 COLGALT1Q8NBJ5 622 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 NETO2Q8NC67 525 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 PTPRN2Q92932 1015 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 KHSRPQ92945 711 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDH8-201ENST00000299345 MAGEB5Q9BZ81 275 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 KLHL8Q9P2G9 620 aaPredicted RBP14.06□□□□□ -0.16
CDH8-201ENST00000299345 CYB561D2O14569 222 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 GYG2O15488 501 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 HNRNPCL1O60812 293 aaKnown RBP14.06□□□□□ -0.16
CDH8-201ENST00000299345 GCATO75600 419 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 KITP10721 976 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 MYL2P10916 166 aa14.06□□□□□ -0.16
CDH8-201ENST00000299345 PDK1Q15118 436 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms