RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 POTEAQ6S8J7 498 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 FRMD7Q6ZUT3 714 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 PTAR1Q7Z6K3 402 aaPredicted RBP11.78□□□□□ -0.52
TRUB1-201ENST00000298746 CDR2LQ86X02 465 aaPredicted RBP11.78□□□□□ -0.52
TRUB1-201ENST00000298746 SLC7A3Q8WY07 619 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 LIN28AQ9H9Z2 209 aaKnown RBP11.78□□□□□ -0.52
TRUB1-201ENST00000298746 ASNSD1Q9NWL6 643 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 LDHAP00338 332 aaKnown RBP11.78□□□□□ -0.52
TRUB1-201ENST00000298746 PRKCEQ02156 737 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 C16orf72Q14CZ0 275 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 UNC5BQ8IZJ1 945 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 PHTF2Q8N3S3 785 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 ZSCAN18Q8TBC5 510 aaPredicted RBP11.78□□□□□ -0.52
TRUB1-201ENST00000298746 AZIN2Q96A70 460 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 DCUN1D5Q9BTE7 237 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 DHRS4Q9BTZ2 278 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 TRPV6Q9H1D0 765 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 XPNPEP1Q9NQW7 623 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 TMX2Q9Y320 296 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 TEX264Q9Y6I9 313 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 SDR42E2A6NKP2 422 aa11.77□□□□□ -0.52
TRUB1-201ENST00000298746 M0QYV0 167 aa11.77□□□□□ -0.52
TRUB1-201ENST00000298746 POLRMTO00411 1230 aaKnown RBP11.77□□□□□ -0.52
TRUB1-201ENST00000298746 KLF11O14901 512 aa11.77□□□□□ -0.52
TRUB1-201ENST00000298746 RALBP11234 206 aa11.77□□□□□ -0.52
TRUB1-201ENST00000298746 KCTD21Q4G0X4 260 aa11.77□□□□□ -0.52
TRUB1-201ENST00000298746 PTPN20Q4JDL3 420 aa11.77□□□□□ -0.52
TRUB1-201ENST00000298746 FBXL19Q6PCT2 694 aa11.77□□□□□ -0.52
TRUB1-201ENST00000298746 UNC5AQ6ZN44 842 aa11.77□□□□□ -0.52
TRUB1-201ENST00000298746 PODNQ7Z5L7 613 aa11.77□□□□□ -0.52
TRUB1-201ENST00000298746 C10orf107Q8IVU9 208 aa11.77□□□□□ -0.52
TRUB1-201ENST00000298746 TNS4Q8IZW8 715 aa11.77□□□□□ -0.52
TRUB1-201ENST00000298746 FBXW8Q8N3Y1 598 aa11.77□□□□□ -0.52
TRUB1-201ENST00000298746 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.77□□□□□ -0.52
TRUB1-201ENST00000298746 ZNF513Q8N8E2 541 aaPredicted RBP11.77□□□□□ -0.52
TRUB1-201ENST00000298746 UBA3Q8TBC4 463 aa11.77□□□□□ -0.52
TRUB1-201ENST00000298746 HSPBAP1Q96EW2 488 aa11.77□□□□□ -0.52
TRUB1-201ENST00000298746 FBXL18Q96ME1 805 aa11.77□□□□□ -0.52
TRUB1-201ENST00000298746 SEMA6AQ9H2E6 1030 aa11.77□□□□□ -0.52
TRUB1-201ENST00000298746 PAIP2BQ9ULR5 123 aaKnown RBP11.77□□□□□ -0.52
TRUB1-201ENST00000298746 SSX2IPQ9Y2D8 614 aa11.77□□□□□ -0.52
TRUB1-201ENST00000298746 CNTNAP2Q9UHC6 1331 aa11.77□□□□□ -0.52
TRUB1-201ENST00000298746 TTLL13PA6NNM8 815 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 E7ESA3 106 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 H3BSA7 217 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 COX4I1P13073 169 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 CDH8P55286 799 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 YWHAEP62258 255 aaKnown RBP11.77□□□□□ -0.53
TRUB1-201ENST00000298746 SNX32Q86XE0 403 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 TFAP2BQ92481 460 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 NIF3L1Q9GZT8 377 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 SIRPGQ9P1W8 387 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 CNTN3Q9P232 1028 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 FEM1BQ9UK73 627 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 GNEQ9Y223 722 aaKnown RBP11.77□□□□□ -0.53
TRUB1-201ENST00000298746 RFPL1O75677 317 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 PENKP01210 267 aaPredicted RBP11.77□□□□□ -0.53
TRUB1-201ENST00000298746 PSAPP07602 524 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 PSMC3P17980 439 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 MX2P20592 715 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 FGFR3P22607 806 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 ABCG1P45844 678 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 SERPINB9P50453 376 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 CES3Q6UWW8 571 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 ZFP28Q8NHY6 868 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 SYTL5Q8TDW5 730 aaPredicted RBP11.77□□□□□ -0.53
TRUB1-201ENST00000298746 MASTLQ96GX5 879 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 ZFRQ96KR1 1074 aaKnown RBP11.77□□□□□ -0.53
TRUB1-201ENST00000298746 HEXIM2Q96MH2 286 aaKnown RBP11.77□□□□□ -0.53
TRUB1-201ENST00000298746 TSNARE1Q96NA8 513 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 SORCS3Q9UPU3 1222 aa11.77□□□□□ -0.53
TRUB1-201ENST00000298746 ZNF541Q9H0D2 1346 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 TPP1O14773 563 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 CASQ2O14958 399 aaPredicted RBP11.76□□□□□ -0.53
TRUB1-201ENST00000298746 TRMUO75648 421 aaKnown RBP11.76□□□□□ -0.53
TRUB1-201ENST00000298746 SEC24DO94855 1032 aaPredicted RBP11.76□□□□□ -0.53
TRUB1-201ENST00000298746 CSPG5O95196 566 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 CRTAMO95727 393 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 SERPINE1P05121 402 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 AOC1P19801 751 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 GMPRP36959 345 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 GK3PQ14409 553 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 C15orf59Q2T9L4 293 aaPredicted RBP11.76□□□□□ -0.53
TRUB1-201ENST00000298746 HSF5Q4G112 596 aaPredicted RBP11.76□□□□□ -0.53
TRUB1-201ENST00000298746 LPCAT2Q7L5N7 544 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 ZBTB46Q86UZ6 589 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 SCYL1Q96KG9 808 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 NUF2Q9BZD4 464 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 DHX35Q9H5Z1 703 aaKnown RBP11.76□□□□□ -0.53
TRUB1-201ENST00000298746 ARHGEF38Q9NXL2 777 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 STK32BQ9NY57 414 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 APOL1O14791 398 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 MED7O43513 233 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 LSM8O95777 96 aaKnown RBP11.76□□□□□ -0.53
TRUB1-201ENST00000298746 TNNC2P02585 160 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 HMGCRP04035 888 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 IMPDH2P12268 514 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 RGS7P49802 495 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 EMC2Q15006 297 aa11.76□□□□□ -0.53
TRUB1-201ENST00000298746 DUOXA2Q1HG44 320 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms