RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 PAPSS1O43252 624 aaPredicted RBP25.26■■□□□ 1.63
SPTSSA-201ENST00000298130 DNAJC6O75061 913 aa25.26■■□□□ 1.63
SPTSSA-201ENST00000298130 LGR5O75473 907 aa25.26■■□□□ 1.63
SPTSSA-201ENST00000298130 LUC7L3O95232 432 aaKnown RBP25.26■■□□□ 1.63
SPTSSA-201ENST00000298130 ZNF286BP0CG31 522 aa25.26■■□□□ 1.63
SPTSSA-201ENST00000298130 OLFML1Q6UWY5 402 aa25.26■■□□□ 1.63
SPTSSA-201ENST00000298130 ZNF333Q96JL9 665 aa25.26■■□□□ 1.63
SPTSSA-201ENST00000298130 THTPAQ9BU02 230 aa25.26■■□□□ 1.63
SPTSSA-201ENST00000298130 APOL6Q9BWW8 343 aa25.26■■□□□ 1.63
SPTSSA-201ENST00000298130 DPEP3Q9H4B8 488 aa25.26■■□□□ 1.63
SPTSSA-201ENST00000298130 STOML1Q9UBI4 398 aa25.26■■□□□ 1.63
SPTSSA-201ENST00000298130 ANK1P16157 1881 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 SYNJ2BP-COX16A0A087WUM0 186 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 PRR5-ARHGAP8B1AHC4 643 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 TGDSO95455 350 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 C22orf31O95567 290 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 ARHGAP8P85298 464 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 CES3Q6UWW8 571 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 DEPDC1BQ8WUY9 529 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 STMN2Q93045 179 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 SIGLEC10Q96LC7 697 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 COX16Q9P0S2 106 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 TRIP11Q15643 1979 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 FZD9O00144 591 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 KCNA4P22459 653 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 RPL10AP62906 217 aaKnown RBP25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 TSNAXIP1Q2TAA8 658 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 TMEM154Q6P9G4 183 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 KCNT2Q6UVM3 1135 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 LCLAT1Q6UWP7 414 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 PLPPR4Q7Z2D5 763 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 ADGRF2Q8IZF7 708 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 NRDE2Q9H7Z3 1164 aa25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 CORO1CQ9ULV4 474 aaPredicted RBP25.25■■□□□ 1.63
SPTSSA-201ENST00000298130 WDR27A2RRH5 827 aa25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 SMAPO00193 183 aa25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 ITM2AO43736 263 aa25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 PDGFRBP09619 1106 aa25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 MXRA7P84157 204 aa25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 OLIG2Q13516 323 aa25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 ACAP1Q15027 740 aa25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 NLRP7Q8WX94 980 aa25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 A6NHS1 94 aa25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 LCP1P13796 627 aa25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 ADORA2BP29275 332 aa25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 VHLP40337 213 aa25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 SESN2P58004 480 aaPredicted RBP25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 SH3D19Q5HYK7 790 aa25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 SPDYAQ5MJ70 313 aa25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 LMNTD2Q8IXW0 634 aa25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 KBTBD2Q8IY47 623 aa25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 SMC1BQ8NDV3 1235 aa25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 LGMNQ99538 433 aa25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 PRMT7Q9NVM4 692 aaPredicted RBP25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 MAGED2Q9UNF1 606 aaPredicted RBP25.24■■□□□ 1.63
SPTSSA-201ENST00000298130 CNMDO75829 334 aa25.23■■□□□ 1.63
SPTSSA-201ENST00000298130 TSHRP16473 764 aa25.23■■□□□ 1.63
SPTSSA-201ENST00000298130 PRKCHP24723 683 aa25.23■■□□□ 1.63
SPTSSA-201ENST00000298130 LRRC74BQ6ZQY2 392 aa25.23■■□□□ 1.63
SPTSSA-201ENST00000298130 POU5F2Q8N7G0 328 aa25.23■■□□□ 1.63
SPTSSA-201ENST00000298130 PPP1R14CQ8TAE6 165 aa25.23■■□□□ 1.63
SPTSSA-201ENST00000298130 PPP1R12CQ9BZL4 782 aa25.23■■□□□ 1.63
SPTSSA-201ENST00000298130 SMARCAD1Q9H4L7 1026 aa25.23■■□□□ 1.63
SPTSSA-201ENST00000298130 DLGAP2Q9P1A6 1054 aa25.23■■□□□ 1.63
SPTSSA-201ENST00000298130 ADM5C9JUS6 153 aa25.23■■□□□ 1.63
SPTSSA-201ENST00000298130 P4HA1P13674 534 aa25.23■■□□□ 1.63
SPTSSA-201ENST00000298130 OCRLQ01968 901 aa25.23■■□□□ 1.63
SPTSSA-201ENST00000298130 BOLA3Q53S33 107 aa25.23■■□□□ 1.63
SPTSSA-201ENST00000298130 CCDC185Q8N715 623 aa25.23■■□□□ 1.63
SPTSSA-201ENST00000298130 DNAH12Q6ZR08 3092 aa25.23■■□□□ 1.63
SPTSSA-201ENST00000298130 E7ENQ6 273 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 HBP1O60381 514 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 SPAG6O75602 509 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 USP1O94782 785 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 TEX44Q53QW1 395 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 PNPLA8Q9NP80 782 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 GAS2O43903 313 aaKnown RBP25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 SLC34A1Q06495 639 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 SLC9A4Q6AI14 798 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 STKLD1Q8NE28 680 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 ATXN7L3BQ96GX2 97 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 CYP3A43Q9HB55 503 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 HNRNPCL1O60812 293 aaKnown RBP25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 KRT38O76015 456 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 CCDC130P13994 396 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 GTF2A2P52657 109 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 SLC6A3Q01959 620 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 KRT72Q14CN4 511 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 ATG14Q6ZNE5 492 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 OR6B3Q8NGW1 331 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 TTC1Q99614 292 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 EBNA1BP2Q99848 306 aaKnown RBP25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 PSAT1Q9Y617 370 aa25.22■■□□□ 1.63
SPTSSA-201ENST00000298130 POLR2AP24928 1970 aaKnown RBP25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 CAPN14A8MX76 684 aa25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 SORBS2O94875 1100 aaKnown RBP25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 PDK2Q15119 407 aa25.21■■□□□ 1.63
SPTSSA-201ENST00000298130 PPM1JQ5JR12 505 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms