RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 ARHGEF6Q15052 776 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 MFSD7Q6UXD7 560 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 RIPOR1Q6ZS17 1223 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 DHDDSQ86SQ9 333 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 SAMD3Q8N6K7 520 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 COLGALT1Q8NBJ5 622 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 FAM151AQ8WW52 585 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 RXFP2Q8WXD0 754 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 POP1Q99575 1024 aaKnown RBP11.33□□□□□ -0.6
PBRM1-201ENST00000296302 WDCPQ9H6R7 721 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 BLOC1S4Q9NUP1 217 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 DDIT4Q9NX09 232 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 VANGL2Q9ULK5 521 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 KIAA1210Q9ULL0 1709 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 TCRBV5S4A2TA0A5A2 114 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 MMP13P45452 471 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 TAF6P49848 677 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 NCALDP61601 193 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 PDK3Q15120 406 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 INAQ16352 499 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 GALNTL6Q49A17 601 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 KCTD21Q4G0X4 260 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 ELMOD1Q8N336 334 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 GANCQ8TET4 914 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 ART4Q93070 314 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 ABHD8Q96I13 439 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 CCDC28BQ9BUN5 200 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 QTRT2Q9H974 415 aaKnown RBP11.33□□□□□ -0.6
PBRM1-201ENST00000296302 COPS7BQ9H9Q2 264 aaPredicted RBP11.33□□□□□ -0.6
PBRM1-201ENST00000296302 DPP3Q9NY33 737 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 MOSPD1Q9UJG1 213 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 TPRKBQ9Y3C4 175 aa11.33□□□□□ -0.6
PBRM1-201ENST00000296302 ZC3H4Q9UPT8 1303 aaKnown RBP11.33□□□□□ -0.6
PBRM1-201ENST00000296302 STX7O15400 261 aaKnown RBP11.32□□□□□ -0.6
PBRM1-201ENST00000296302 CCT8P50990 548 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 NME5P56597 212 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 XIAPP98170 497 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 LACTB2Q53H82 288 aaPredicted RBP11.32□□□□□ -0.6
PBRM1-201ENST00000296302 SPANXN3Q5MJ09 141 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 EFCAB12Q6NXP0 572 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 ELMSAN1Q6PJG2 1045 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 HDDC2Q7Z4H3 204 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 ARHGEF19Q8IW93 802 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 C4orf19Q8IY42 314 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 NDEL1Q9GZM8 345 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 PLGRKTQ9HBL7 147 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 KLHL3Q9UH77 587 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 POLG2Q9UHN1 485 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 NDUFAF1Q9Y375 327 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 NCANO14594 1321 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 RCCD1A6NED2 376 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 KRT36O76013 467 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 ICAM1P05362 532 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 SLC2A3P11169 496 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 ANPEPP15144 967 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 RRM2P31350 389 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 NCF4Q15080 339 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 MIIPQ5JXC2 388 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 RBM46Q8TBY0 533 aaKnown RBP11.32□□□□□ -0.6
PBRM1-201ENST00000296302 PIWIL2Q8TC59 973 aaKnown RBP11.32□□□□□ -0.6
PBRM1-201ENST00000296302 FNIP1Q8TF40 1166 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 GORASP1Q9BQQ3 440 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 VTA1Q9NP79 307 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 SELENONQ9NZV5 590 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 UBQLN1Q9UMX0 589 aaKnown RBP11.32□□□□□ -0.6
PBRM1-201ENST00000296302 C15orf38-AP3S2A0A0A6YYH1 394 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 PPP3CCP48454 512 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 CSHL1Q14406 222 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 ZNF268Q14587 947 aaPredicted RBP11.32□□□□□ -0.6
PBRM1-201ENST00000296302 ARHGAP17Q68EM7 881 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 FAM45BPQ6NSW5 357 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 AAGABQ6PD74 315 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 ARPINQ7Z6K5 226 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 EXOC3L1Q86VI1 746 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 CAMK1DQ8IU85 385 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 INPP4AQ96PE3 977 aaPredicted RBP11.32□□□□□ -0.6
PBRM1-201ENST00000296302 GPR63Q9BZJ6 419 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 LRRC19Q9H756 370 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 ADAM30Q9UKF2 790 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 F8W810 466 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 INPP4BO15327 924 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 PEX1O43933 1283 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 SHOX2O60902 331 aaPredicted RBP11.32□□□□□ -0.6
PBRM1-201ENST00000296302 CYP2F1P24903 491 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 PTPN11Q06124 597 aaPredicted RBP11.32□□□□□ -0.6
PBRM1-201ENST00000296302 LRRC71Q8N4P6 559 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 EMC1Q8N766 993 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 ATG16L2Q8NAA4 619 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 TAAR1Q96RJ0 339 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 RRN3Q9NYV6 651 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 TMCC3Q9ULS5 477 aa11.32□□□□□ -0.6
PBRM1-201ENST00000296302 A0A096LPK6 155 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 C2orf81A6NN90 581 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 C2CD2LO14523 706 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 BAIAP3O94812 1187 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 ARP10275 920 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 CRABP2P29373 138 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 BCAT1P54687 386 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 VAC14Q08AM6 782 aa11.31□□□□□ -0.6
PBRM1-201ENST00000296302 MPZL3Q6UWV2 235 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms