RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ATP10AO60312 1499 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 ZFYVE16Q7Z3T8 1539 aa8.96□□□□□ -0.98
NIPBL-201ENST00000282516 ATMINO43313 823 aaPredicted RBP8.95□□□□□ -0.98
NIPBL-201ENST00000282516 ASS1P00966 412 aaKnown RBP8.95□□□□□ -0.98
NIPBL-201ENST00000282516 PDGFRBP09619 1106 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 UCHL3P15374 230 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 COMTP21964 271 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 RASA2Q15283 850 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 ATF7IP2Q5U623 682 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 ZNF772Q68DY9 489 aaPredicted RBP8.95□□□□□ -0.98
NIPBL-201ENST00000282516 BRINP3Q76B58 766 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 EXOC3L1Q86VI1 746 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 NUP153P49790 1475 aaKnown RBP8.95□□□□□ -0.98
NIPBL-201ENST00000282516 LOC100506127A0A0U1RQW1 187 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 KPNA5O15131 536 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 HLA-DQA2P01906 255 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 CACNA2D1P54289 1103 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 COPZ1P61923 177 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 DNAJC3Q13217 504 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 TKFCQ3LXA3 575 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 FGD3Q5JSP0 725 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 LRRC74BQ6ZQY2 392 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 STRBPQ96SI9 672 aaKnown RBP8.95□□□□□ -0.98
NIPBL-201ENST00000282516 KLF6Q99612 283 aaPredicted RBP8.95□□□□□ -0.98
NIPBL-201ENST00000282516 EPB41L4AQ9HCS5 686 aaPredicted RBP8.95□□□□□ -0.98
NIPBL-201ENST00000282516 PPP2R3BQ9Y5P8 575 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 CYP2C8P10632 490 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 FCHO2Q0JRZ9 810 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 GPAT2Q6NUI2 795 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 PI16Q6UXB8 463 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 PACS1Q6VY07 963 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 AGMOQ6ZNB7 445 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 CRYL1Q9Y2S2 319 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 IRAK3Q9Y616 596 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 FBXO21O94952 628 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 HNRNPH1P31943 449 aaKnown RBP8.95□□□□□ -0.98
NIPBL-201ENST00000282516 ALDH9A1P49189 494 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 RENBPP51606 427 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 HIRAP54198 1017 aaPredicted RBP8.95□□□□□ -0.98
NIPBL-201ENST00000282516 IL2P60568 153 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 GMFBP60983 142 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 RBBP4Q09028 425 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 PRKAA1Q13131 559 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 QPRTQ15274 297 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 AGKQ53H12 422 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 PARK7Q99497 189 aaKnown RBP8.95□□□□□ -0.98
NIPBL-201ENST00000282516 DSEQ9UL01 958 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 ENTPD4Q9Y227 616 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 ADGRL3Q9HAR2 1447 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 ZNF335Q9H4Z2 1342 aaPredicted RBP8.95□□□□□ -0.98
NIPBL-201ENST00000282516 UMPSP11172 480 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 MTA1Q13330 715 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 TMEM120AQ9BXJ8 343 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 CHKBQ9Y259 395 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 CLOCKO15516 846 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 TXNP10599 105 aaKnown RBP8.95□□□□□ -0.98
NIPBL-201ENST00000282516 PRKAR1AP10644 381 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 COILP38432 576 aaPredicted RBP8.95□□□□□ -0.98
NIPBL-201ENST00000282516 PIK3CGP48736 1102 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 RPL19P84098 196 aaKnown RBP8.95□□□□□ -0.98
NIPBL-201ENST00000282516 ARHGEF19Q8IW93 802 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 MAGEB10Q96LZ2 347 aaPredicted RBP8.95□□□□□ -0.98
NIPBL-201ENST00000282516 LRRC40Q9H9A6 602 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 A0A1W2PQJ5 194 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 RBP3P10745 1247 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 LPIN1Q14693 890 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 HERC6Q8IVU3 1022 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 OR6Y1Q8NGX8 325 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 BBS4Q96RK4 519 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 OSGEPL1Q9H4B0 414 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 CORO2BQ9UQ03 480 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 MROH7Q68CQ1 1323 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 C15orf38-AP3S2A0A0A6YYH1 394 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 USP27XA6NNY8 438 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 STX16-NPEPL1H3BU86 382 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 STX16O14662 325 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 NR3C2P08235 984 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 XKR3Q5GH77 459 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 ARPINQ7Z6K5 226 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 TBC1D10CQ8IV04 446 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 NUAK2Q9H093 628 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 TCF7L2Q9NQB0 619 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 MYH8P13535 1937 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 GLP2RO95838 553 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 CYP2A7P20853 494 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 NTSP30990 170 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 CDC42P60953 191 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 SAMD4BQ5PRF9 694 aaKnown RBP8.95□□□□□ -0.98
NIPBL-201ENST00000282516 STRA8Q7Z7C7 330 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 UNC5CLQ8IV45 518 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 DEFB107AQ8IZN7 70 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 ORAI2Q96SN7 254 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 TRIM9Q9C026 710 aa8.95□□□□□ -0.98
NIPBL-201ENST00000282516 SMCO3A2RU48 225 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 ZNF879B4DU55 563 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 TEX33O43247 280 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 TCF4P15884 667 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 HSD17B3P37058 310 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 PLD1Q13393 1074 aa8.94□□□□□ -0.98
NIPBL-201ENST00000282516 MGAT5BQ3V5L5 792 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms