RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 LRG1P02750 347 aa11.84□□□□□ -0.51
XRCC4-201ENST00000282268 HMGA1P17096 107 aaKnown RBP11.84□□□□□ -0.51
XRCC4-201ENST00000282268 GBP1P32455 592 aa11.84□□□□□ -0.51
XRCC4-201ENST00000282268 GGCXP38435 758 aa11.84□□□□□ -0.51
XRCC4-201ENST00000282268 UBE3AQ05086 875 aa11.84□□□□□ -0.51
XRCC4-201ENST00000282268 ADCY2Q08462 1091 aa11.84□□□□□ -0.51
XRCC4-201ENST00000282268 BOLA3Q53S33 107 aa11.84□□□□□ -0.51
XRCC4-201ENST00000282268 DNAJB7Q7Z6W7 309 aaPredicted RBP11.84□□□□□ -0.51
XRCC4-201ENST00000282268 SLC22A17Q8WUG5 538 aa11.84□□□□□ -0.51
XRCC4-201ENST00000282268 NT5C3BQ969T7 300 aa11.84□□□□□ -0.51
XRCC4-201ENST00000282268 SAMD11Q96NU1 681 aa11.84□□□□□ -0.51
XRCC4-201ENST00000282268 KCTD15Q96SI1 283 aaPredicted RBP11.84□□□□□ -0.51
XRCC4-201ENST00000282268 NCAPGQ9BPX3 1015 aa11.84□□□□□ -0.51
XRCC4-201ENST00000282268 MAK16Q9BXY0 300 aaKnown RBP11.84□□□□□ -0.51
XRCC4-201ENST00000282268 NACA2Q9H009 215 aa11.84□□□□□ -0.51
XRCC4-201ENST00000282268 WDCPQ9H6R7 721 aa11.84□□□□□ -0.51
XRCC4-201ENST00000282268 SLC28A3Q9HAS3 691 aa11.84□□□□□ -0.51
XRCC4-201ENST00000282268 FZD10Q9ULW2 581 aa11.84□□□□□ -0.51
XRCC4-201ENST00000282268 PATJQ8NI35 1801 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 GOLGA6L10A0A0M3HER8 536 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 SLC12A8A0AV02 714 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 C3orf70A6NLC5 250 aaPredicted RBP11.83□□□□□ -0.52
XRCC4-201ENST00000282268 EFCAB8A8MWE9 144 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 H3BNC9 293 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 FSCN2O14926 492 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 CREB3O43889 395 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 CLASP2O75122 1294 aaKnown RBP11.83□□□□□ -0.52
XRCC4-201ENST00000282268 ENDOD1O94919 500 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 EPCAMP16422 314 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 CDKN2BP42772 138 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 DPYSL3Q14195 570 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 ELF2Q15723 593 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 RAB30Q15771 203 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 TFDP3Q5H9I0 405 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 PPM1LQ5SGD2 360 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 ZNF697Q5TEC3 545 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 LILRA6Q6PI73 481 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 CCDC149Q6ZUS6 474 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 GPR65Q8IYL9 337 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 HS6ST3Q8IZP7 471 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 TTC16Q8NEE8 873 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 CMASQ8NFW8 434 aaPredicted RBP11.83□□□□□ -0.52
XRCC4-201ENST00000282268 UBE2Q2Q8WVN8 375 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 ATG4AQ8WYN0 398 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 TKTL2Q9H0I9 626 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 DDX47Q9H0S4 455 aaKnown RBP11.83□□□□□ -0.52
XRCC4-201ENST00000282268 PCDH18Q9HCL0 1135 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 TRPC7Q9HCX4 862 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 ZNF334Q9HCZ1 680 aaPredicted RBP11.83□□□□□ -0.52
XRCC4-201ENST00000282268 WDR6Q9NNW5 1121 aaKnown RBP11.83□□□□□ -0.52
XRCC4-201ENST00000282268 ANLNQ9NQW6 1124 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 COMMD8Q9NX08 183 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 RRN3Q9NYV6 651 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 TRPM5Q9NZQ8 1165 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 FBXW11Q9UKB1 542 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 TTC7AQ9ULT0 858 aaPredicted RBP11.83□□□□□ -0.52
XRCC4-201ENST00000282268 R3HDM2Q9Y2K5 976 aaKnown RBP11.83□□□□□ -0.52
XRCC4-201ENST00000282268 MYO16Q9Y6X6 1858 aa11.83□□□□□ -0.52
XRCC4-201ENST00000282268 GBF1Q92538 1859 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 hCG_1818297A0A087WSY0 165 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 EPOPA6NHQ4 379 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 F9P00740 461 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 L1CAMP32004 1257 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 CLCN4P51793 760 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 SLC7A5Q01650 507 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 EFHC2Q5JST6 749 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 ZNF572Q7Z3I7 529 aaPredicted RBP11.82□□□□□ -0.52
XRCC4-201ENST00000282268 ADGRD2Q7Z7M1 963 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 MAP7D3Q8IWC1 876 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 ZDHHC14Q8IZN3 488 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 PRELID2Q8N945 189 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.82□□□□□ -0.52
XRCC4-201ENST00000282268 TEKT4Q8WW24 435 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 MAGOHBQ96A72 148 aaKnown RBP11.82□□□□□ -0.52
XRCC4-201ENST00000282268 RPGRIP1Q96KN7 1286 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 CORO1BQ9BR76 489 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 LRRC1Q9BTT6 524 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 TTLL2Q9BWV7 592 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 SIK2Q9H0K1 926 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 SMOC2Q9H3U7 446 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 MAN1C1Q9NR34 630 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.82□□□□□ -0.52
XRCC4-201ENST00000282268 HSFX1Q9UBD0 423 aa11.82□□□□□ -0.52
XRCC4-201ENST00000282268 FAM92AA1XBS5 289 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 IRAK2O43187 625 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 TLR5O60602 858 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 CST8O60676 142 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 RFPL2O75678 378 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 TJP3O95049 919 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 MYL4P12829 197 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 GJA1P17302 382 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 ADRA1BP35368 520 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 KCNJ1P48048 391 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 CXCR3P49682 368 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 ARSEP51690 589 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 TBX4P57082 545 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 COPS2P61201 443 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 RBM10P98175 930 aaKnown RBP11.81□□□□□ -0.52
XRCC4-201ENST00000282268 CLUL1Q15846 466 aa11.81□□□□□ -0.52
XRCC4-201ENST00000282268 ARL13BQ3SXY8 428 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms