RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ZMIZ2Q8NF64 920 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 PCDH19Q8TAB3 1148 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 PCED1BQ96HM7 432 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 YME1L1Q96TA2 773 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 MAK16Q9BXY0 300 aaKnown RBP21.8■■□□□ 1.08
YBX3-202ENST00000279550 RHOBTB2Q9BYZ6 727 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 CXXC1Q9P0U4 656 aaPredicted RBP21.8■■□□□ 1.08
YBX3-202ENST00000279550 TLDC2A0PJX2 215 aa21.79■■□□□ 1.08
YBX3-202ENST00000279550 AP1G2O75843 785 aa21.79■■□□□ 1.08
YBX3-202ENST00000279550 RPL22P35268 128 aaKnown RBP21.79■■□□□ 1.08
YBX3-202ENST00000279550 IRAK1P51617 712 aa21.79■■□□□ 1.08
YBX3-202ENST00000279550 GNGT1P63211 74 aa21.79■■□□□ 1.08
YBX3-202ENST00000279550 MRPS5P82675 430 aaKnown RBP21.79■■□□□ 1.08
YBX3-202ENST00000279550 FUT10Q6P4F1 479 aa21.79■■□□□ 1.08
YBX3-202ENST00000279550 HFE2Q6ZVN8 426 aa21.79■■□□□ 1.08
YBX3-202ENST00000279550 HOOK3Q86VS8 718 aa21.79■■□□□ 1.08
YBX3-202ENST00000279550 THEM5Q8N1Q8 247 aa21.79■■□□□ 1.08
YBX3-202ENST00000279550 DPF3Q92784 378 aa21.79■■□□□ 1.08
YBX3-202ENST00000279550 MCF2LO15068 1137 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 CAPN15O75808 1086 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 OAZ2O95190 189 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 GJB5O95377 273 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 TTC4O95801 387 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 RBP3P10745 1247 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 L1CAMP32004 1257 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 MATKP42679 507 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 NRLP54845 237 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 SLC8A3P57103 927 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 MAGOHP61326 146 aaKnown RBP21.78■■□□□ 1.08
YBX3-202ENST00000279550 PPARDQ03181 441 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 ELAVL2Q12926 359 aaKnown RBP21.78■■□□□ 1.08
YBX3-202ENST00000279550 FAM182AQ5T1J6 154 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 ERMARDQ5T6L9 678 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 FAM171A1Q5VUB5 890 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 LRRC31Q6UY01 552 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 MAP7D3Q8IWC1 876 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 PLD5Q8N7P1 536 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 FAM71DQ8N9W8 422 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 OR10T2Q8NGX3 314 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 BCL7CQ8WUZ0 217 aaPredicted RBP21.78■■□□□ 1.08
YBX3-202ENST00000279550 FAM149B1Q96BN6 582 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 FAF2Q96CS3 445 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 KCTD15Q96SI1 283 aaPredicted RBP21.78■■□□□ 1.08
YBX3-202ENST00000279550 NCAPGQ9BPX3 1015 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 TSPYL1Q9H0U9 437 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 LRRC4Q9HBW1 653 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 MTMR10Q9NXD2 777 aa21.78■■□□□ 1.08
YBX3-202ENST00000279550 LAMA2P24043 3122 aaKnown RBP21.78■■□□□ 1.08
YBX3-202ENST00000279550 DESP17661 470 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 ACTN2P35609 894 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 SLCO1A2P46721 670 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 SULT1E1P49888 294 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 TKTL1P51854 596 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 PPP6R3Q5H9R7 873 aaPredicted RBP21.77■■□□□ 1.08
YBX3-202ENST00000279550 INTS6LQ5JSJ4 861 aaKnown RBP21.77■■□□□ 1.08
YBX3-202ENST00000279550 SPOUT1Q5T280 376 aaKnown RBP21.77■■□□□ 1.08
YBX3-202ENST00000279550 SLC9A4Q6AI14 798 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 TAB3Q8N5C8 712 aaPredicted RBP21.77■■□□□ 1.08
YBX3-202ENST00000279550 MYCBPAPQ8TBZ2 947 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 RSAD2Q8WXG1 361 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 HERVK_113Q902F9 699 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 PRCCQ92733 491 aaPredicted RBP21.77■■□□□ 1.08
YBX3-202ENST00000279550 C9orf72Q96LT7 481 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 KCNK16Q96T55 309 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 LBHD1Q9BQE6 289 aaPredicted RBP21.77■■□□□ 1.08
YBX3-202ENST00000279550 ULBP1Q9BZM6 244 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 DHX35Q9H5Z1 703 aaKnown RBP21.77■■□□□ 1.08
YBX3-202ENST00000279550 AP4E1Q9UPM8 1137 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 MRPL42Q9Y6G3 142 aaKnown RBP21.77■■□□□ 1.08
YBX3-202ENST00000279550 PTPRSQ13332 1948 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 FGFR3P22607 806 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 ROR1Q01973 937 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 GAD2Q05329 585 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 MORF4L2Q15014 288 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 ANKRD22Q5VYY1 191 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 KCNT2Q6UVM3 1135 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 ZC3H18Q86VM9 953 aaKnown RBP21.77■■□□□ 1.08
YBX3-202ENST00000279550 CEP57Q86XR8 500 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 SIX6OS1Q8N1H7 587 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.77■■□□□ 1.08
YBX3-202ENST00000279550 MYLPFQ96A32 169 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 PGM2Q96G03 612 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 RBM15Q96T37 977 aaKnown RBP eCLIP21.77■■□□□ 1.08
YBX3-202ENST00000279550 ZNF670Q9BS34 389 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 FOXP3Q9BZS1 431 aa21.77■■□□□ 1.08
YBX3-202ENST00000279550 FARP1Q9Y4F1 1045 aaPredicted RBP21.77■■□□□ 1.08
YBX3-202ENST00000279550 CCDC85CA6NKD9 419 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 HHLA1C9JL84 531 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 APOL1O14791 398 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 CYP2F1P24903 491 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 IFI35P80217 286 aaPredicted RBP21.76■■□□□ 1.07
YBX3-202ENST00000279550 TSPY1Q01534 308 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 GUCY1A3Q02108 690 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 DPYSL2Q16555 572 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 SLC25A52Q3SY17 297 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 VARS2Q5ST30 1063 aaKnown RBP21.76■■□□□ 1.07
YBX3-202ENST00000279550 SYPL2Q5VXT5 272 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 FAM171BQ6P995 826 aa21.76■■□□□ 1.07
YBX3-202ENST00000279550 DARS2Q6PI48 645 aaKnown RBP21.76■■□□□ 1.07
YBX3-202ENST00000279550 STRADAQ7RTN6 431 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms