RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 MLH1P40692 756 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 PEX5P50542 639 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 AQP5P55064 265 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 MGAT5BQ3V5L5 792 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 PPP1R26Q5T8A7 1209 aaPredicted RBP14.8□□□□□ -0.04
TMEM47-201ENST00000275954 PLEKHA7Q6IQ23 1121 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 GLB1LQ6UWU2 654 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 MON1BQ7L1V2 547 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 PRCCQ92733 491 aaPredicted RBP14.8□□□□□ -0.04
TMEM47-201ENST00000275954 DDX27Q96GQ7 796 aaKnown RBP14.8□□□□□ -0.04
TMEM47-201ENST00000275954 ZMYND8Q9ULU4 1186 aaPredicted RBP14.8□□□□□ -0.04
TMEM47-201ENST00000275954 STXBP5LQ9Y2K9 1186 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 LAMB4A4D0S4 1761 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 FSCBQ5H9T9 825 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 ALLCQ8N6M5 410 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 SPOCK2Q92563 424 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 PPCSQ9HAB8 311 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 SLC38A7Q9NVC3 462 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 TRIM33Q9UPN9 1127 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 KAT6AQ92794 2004 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 WDR27A2RRH5 827 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 STK25O00506 426 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 CLGNO14967 610 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 VNN1O95497 513 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 INHAP05111 366 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 ENO3P13929 434 aaPredicted RBP14.8□□□□□ -0.04
TMEM47-201ENST00000275954 KCNA4P22459 653 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 ZNF235Q14590 738 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 EFTUD2Q15029 972 aaKnown RBP eCLIP14.8□□□□□ -0.04
TMEM47-201ENST00000275954 KCNA10Q16322 511 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 WSCD1Q658N2 575 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 TXNRD3NBQ6F5E7 133 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 FUKQ8N0W3 1084 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 ZNF75CPQ92670 426 aaPredicted RBP14.8□□□□□ -0.04
TMEM47-201ENST00000275954 MTBPQ96DY7 904 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 SGIP1Q9BQI5 828 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 TRIM56Q9BRZ2 755 aaKnown RBP14.8□□□□□ -0.04
TMEM47-201ENST00000275954 KDM4CQ9H3R0 1056 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 NXF3Q9H4D5 531 aaKnown RBP14.8□□□□□ -0.04
TMEM47-201ENST00000275954 CREBZFQ9NS37 354 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 TRMT13Q9NUP7 481 aaKnown RBP14.8□□□□□ -0.04
TMEM47-201ENST00000275954 GRHL1Q9NZI5 618 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 COQ4Q9Y3A0 265 aa14.8□□□□□ -0.04
TMEM47-201ENST00000275954 MAFBQ9Y5Q3 323 aaPredicted RBP14.8□□□□□ -0.04
TMEM47-201ENST00000275954 SMAPO00193 183 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 CLDN5O00501 218 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 LRCH4O75427 683 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 ERBB2P04626 1255 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 MGAT1P26572 445 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 NSL1Q96IY1 281 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 ADAM2Q99965 735 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 SLC24A3Q9HC58 644 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 MTO1Q9Y2Z2 717 aaKnown RBP14.79□□□□□ -0.04
TMEM47-201ENST00000275954 PFDN6O15212 129 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 TAC1P20366 129 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 CD52P31358 61 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 PTGIRP43119 386 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 PAPOLAP51003 745 aaKnown RBP14.79□□□□□ -0.04
TMEM47-201ENST00000275954 SPATA24Q86W54 205 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 RASAL3Q86YV0 1011 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 PCSK9Q8NBP7 692 aaKnown RBP14.79□□□□□ -0.04
TMEM47-201ENST00000275954 KAT2BQ92831 832 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 SCLYQ96I15 445 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 APBA2Q99767 749 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 VTA1Q9NP79 307 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 GOLGA8QA0A0J9YX86 632 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 TYW5A2RUC4 315 aaKnown RBP14.79□□□□□ -0.04
TMEM47-201ENST00000275954 GOLGA8OA6NCC3 632 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 GOLGA8NF8WBI6 632 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 SERPINB4P48594 390 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 YWHAHQ04917 246 aaPredicted RBP14.79□□□□□ -0.04
TMEM47-201ENST00000275954 FOXD4Q12950 439 aaPredicted RBP14.79□□□□□ -0.04
TMEM47-201ENST00000275954 PIGZQ86VD9 579 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 URGCPQ8TCY9 931 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 CKAP2Q8WWK9 683 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 ELMO2Q96JJ3 720 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 SRPK1Q96SB4 655 aaKnown RBP14.79□□□□□ -0.04
TMEM47-201ENST00000275954 PTPN18Q99952 460 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 SYT15Q9BQS2 421 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 LRRC4CQ9HCJ2 640 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 EPS15L1Q9UBC2 864 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 FAM8A1Q9UBU6 413 aa14.79□□□□□ -0.04
TMEM47-201ENST00000275954 SLC15A5A6NIM6 579 aa14.78□□□□□ -0.04
TMEM47-201ENST00000275954 SMIM10L2AP0DMW4 78 aa14.78□□□□□ -0.04
TMEM47-201ENST00000275954 SMIM10L2BP0DMW5 78 aa14.78□□□□□ -0.04
TMEM47-201ENST00000275954 APLP1P51693 650 aa14.78□□□□□ -0.04
TMEM47-201ENST00000275954 KCNJ2P63252 427 aa14.78□□□□□ -0.04
TMEM47-201ENST00000275954 MTHFD1LQ6UB35 978 aa14.78□□□□□ -0.04
TMEM47-201ENST00000275954 BBS12Q6ZW61 710 aa14.78□□□□□ -0.04
TMEM47-201ENST00000275954 MRPL45Q9BRJ2 306 aaKnown RBP14.78□□□□□ -0.04
TMEM47-201ENST00000275954 ELOVL4Q9GZR5 314 aa14.78□□□□□ -0.04
TMEM47-201ENST00000275954 NDE1Q9NXR1 346 aa14.78□□□□□ -0.04
TMEM47-201ENST00000275954 ANP32DO95626 131 aa14.78□□□□□ -0.04
TMEM47-201ENST00000275954 USP17L7P0C7H9 530 aa14.78□□□□□ -0.04
TMEM47-201ENST00000275954 SERPINB3P29508 390 aa14.78□□□□□ -0.04
TMEM47-201ENST00000275954 PBX3P40426 434 aa14.78□□□□□ -0.04
TMEM47-201ENST00000275954 MMP13P45452 471 aa14.78□□□□□ -0.04
TMEM47-201ENST00000275954 ZNF143P52747 638 aaPredicted RBP14.78□□□□□ -0.04
TMEM47-201ENST00000275954 LBX1P52954 281 aa14.78□□□□□ -0.04
TMEM47-201ENST00000275954 HIC1Q14526 733 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms