RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 CALCOCO1Q9P1Z2 691 aa17.95■□□□□ 0.46
SKP2-201ENST00000274254 SFMBT1Q9UHJ3 866 aa17.95■□□□□ 0.46
SKP2-201ENST00000274254 GUCA1BQ9UMX6 200 aa17.95■□□□□ 0.46
SKP2-201ENST00000274254 TRAV19A0A0A6YYK7 116 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 M0QYT0 321 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 IRAK2O43187 625 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 CCP110O43303 1012 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 PROSCO94903 275 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 HDCP19113 662 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 SULT1E1P49888 294 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 SLC7A9P82251 487 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 ATP11AP98196 1134 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 EFEMP1Q12805 493 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 NNTQ13423 1086 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 SMAD4Q13485 552 aaKnown RBP17.94■□□□□ 0.46
SKP2-201ENST00000274254 CBX2Q14781 532 aaPredicted RBP17.94■□□□□ 0.46
SKP2-201ENST00000274254 ACAP1Q15027 740 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 SH3PXD2AQ5TCZ1 1133 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 STRADAQ7RTN6 431 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 NPAS3Q8IXF0 933 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 CMTM8Q8IZV2 173 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 ARL14EPQ8N8R7 260 aaPredicted RBP17.94■□□□□ 0.46
SKP2-201ENST00000274254 ADAM32Q8TC27 787 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 FGF13Q92913 245 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 ZSWIM3Q96MP5 696 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 CYP2S1Q96SQ9 504 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 POMKQ9H5K3 350 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 PAXBP1Q9Y5B6 917 aa17.94■□□□□ 0.46
SKP2-201ENST00000274254 GRXCR2A6NFK2 248 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 BUB1BO60566 1050 aaPredicted RBP17.93■□□□□ 0.46
SKP2-201ENST00000274254 MAN1A1P33908 653 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 HDAC4P56524 1084 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 IFI16Q16666 785 aaKnown RBP17.93■□□□□ 0.46
SKP2-201ENST00000274254 GET4Q7L5D6 327 aaPredicted RBP17.93■□□□□ 0.46
SKP2-201ENST00000274254 ARFGAP1Q8N6T3 406 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 MAFAQ8NHW3 353 aaPredicted RBP17.93■□□□□ 0.46
SKP2-201ENST00000274254 FAM172AQ8WUF8 416 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 ZFRQ96KR1 1074 aaKnown RBP17.93■□□□□ 0.46
SKP2-201ENST00000274254 SERPINB11Q96P15 392 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 NACA2Q9H009 215 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 DDIT4Q9NX09 232 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 GDE1Q9NZC3 331 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 RASAL2Q9UJF2 1139 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 CAPN6Q9Y6Q1 641 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 C5orf42Q9H799 3197 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 GRID2IPA4D2P6 1211 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 GOLGA6L9A6NEM1 432 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 MSI1O43347 362 aaKnown RBP17.93■□□□□ 0.46
SKP2-201ENST00000274254 MBTPS2O43462 519 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 MOCS3O95396 460 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 F9P00740 461 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 WEE1P30291 646 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 RDXP35241 583 aaKnown RBP17.93■□□□□ 0.46
SKP2-201ENST00000274254 NAP1L1P55209 391 aaKnown RBP17.93■□□□□ 0.46
SKP2-201ENST00000274254 MESDQ14696 234 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 CDO1Q16878 200 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 RAB6CQ53S08 254 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 C11orf63Q6NUN7 778 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 MIB1Q86YT6 1006 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 LRRC57Q8N9N7 239 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 SLC39A13Q96H72 371 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 KLF16Q9BXK1 252 aaPredicted RBP17.93■□□□□ 0.46
SKP2-201ENST00000274254 RAB6CQ9H0N0 254 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 SLITRK6Q9H5Y7 841 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 FAM204AQ9H8W3 233 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 PIGVQ9NUD9 493 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 TMEM51Q9NW97 253 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.93■□□□□ 0.461e-7■□□□□ 10.1
SKP2-201ENST00000274254 CDH7Q9ULB5 785 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 TLR6Q9Y2C9 796 aa17.93■□□□□ 0.46
SKP2-201ENST00000274254 HBS1LQ9Y450 684 aaKnown RBP17.93■□□□□ 0.46
SKP2-201ENST00000274254 LRCH4O75427 683 aa17.92■□□□□ 0.46
SKP2-201ENST00000274254 IGLV3-27P01718 113 aa17.92■□□□□ 0.46
SKP2-201ENST00000274254 CKMP06732 381 aa17.92■□□□□ 0.46
SKP2-201ENST00000274254 MBL2P11226 248 aaPredicted RBP17.92■□□□□ 0.46
SKP2-201ENST00000274254 DESP17661 470 aa17.92■□□□□ 0.46
SKP2-201ENST00000274254 GBP1P32455 592 aa17.92■□□□□ 0.46
SKP2-201ENST00000274254 ATXN1P54253 815 aaKnown RBP17.92■□□□□ 0.46
SKP2-201ENST00000274254 ZXDBP98169 803 aa17.92■□□□□ 0.46
SKP2-201ENST00000274254 NME3Q13232 169 aa17.92■□□□□ 0.46
SKP2-201ENST00000274254 TRIP4Q15650 581 aaPredicted RBP17.92■□□□□ 0.46
SKP2-201ENST00000274254 LEXMQ3ZCV2 418 aa17.92■□□□□ 0.46
SKP2-201ENST00000274254 ARHGAP26Q9UNA1 814 aa17.92■□□□□ 0.46
SKP2-201ENST00000274254 SPTBN5Q9NRC6 3674 aaKnown RBP17.91■□□□□ 0.46
SKP2-201ENST00000274254 SLC12A8A0AV02 714 aa17.91■□□□□ 0.46
SKP2-201ENST00000274254 RNF8O76064 485 aa17.91■□□□□ 0.46
SKP2-201ENST00000274254 PCK1P35558 622 aa17.91■□□□□ 0.46
SKP2-201ENST00000274254 AVPR1AP37288 418 aa17.91■□□□□ 0.46
SKP2-201ENST00000274254 HELZP42694 1942 aaKnown RBP17.91■□□□□ 0.46
SKP2-201ENST00000274254 CXCR3P49682 368 aa17.91■□□□□ 0.46
SKP2-201ENST00000274254 KPNA1P52294 538 aaPredicted RBP17.91■□□□□ 0.46
SKP2-201ENST00000274254 COG7P83436 770 aa17.91■□□□□ 0.46
SKP2-201ENST00000274254 DEUP1Q05D60 604 aa17.91■□□□□ 0.46
SKP2-201ENST00000274254 RING1Q06587 406 aa17.91■□□□□ 0.46
SKP2-201ENST00000274254 DAB2IPQ5VWQ8 1189 aa17.91■□□□□ 0.46
SKP2-201ENST00000274254 SLFN11Q7Z7L1 901 aa17.91■□□□□ 0.46
SKP2-201ENST00000274254 CPNE8Q86YQ8 564 aa17.91■□□□□ 0.46
SKP2-201ENST00000274254 ARID3BQ8IVW6 561 aaPredicted RBP17.91■□□□□ 0.46
SKP2-201ENST00000274254 C17orf53Q8N3J3 647 aaPredicted RBP17.91■□□□□ 0.46
SKP2-201ENST00000274254 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms