RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 RPL17P18621 184 aaKnown RBP9.66□□□□□ -0.86
SSR3-201ENST00000265044 SCN1AP35498 2009 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 SLC5A3P53794 718 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 RPL10AP62906 217 aaKnown RBP9.66□□□□□ -0.86
SSR3-201ENST00000265044 ZNF252P-AS1Q0IIN9 211 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 PDK1Q15118 436 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 RAB6CQ53S08 254 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 TMC7Q7Z402 723 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 KDELC2Q7Z4H8 507 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 MRPL10Q7Z7H8 261 aaKnown RBP9.66□□□□□ -0.86
SSR3-201ENST00000265044 LRRC43Q8N309 656 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 CCDC185Q8N715 623 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 TFB1MQ8WVM0 346 aaKnown RBP9.66□□□□□ -0.86
SSR3-201ENST00000265044 CELF6Q96J87 481 aaKnown RBP9.66□□□□□ -0.86
SSR3-201ENST00000265044 SMOQ99835 787 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 TTPALQ9BTX7 342 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 RAB6CQ9H0N0 254 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 CDC42EP4Q9H3Q1 356 aaKnown RBP9.66□□□□□ -0.86
SSR3-201ENST00000265044 PAK5Q9P286 719 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 RSPH14Q9UHP6 348 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 PHF24Q9UPV7 400 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 PCNTO95613 3336 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 CFAP69A5D8W1 941 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 HMGB1P1B2RPK0 211 aaPredicted RBP9.66□□□□□ -0.86
SSR3-201ENST00000265044 KCNK1O00180 336 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 NDUFAB1O14561 156 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 INHBAP08476 426 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 RARGP13631 454 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 TFE3P19532 575 aaPredicted RBP9.66□□□□□ -0.86
SSR3-201ENST00000265044 CCR1P32246 355 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 SESN2P58004 480 aaPredicted RBP9.66□□□□□ -0.86
SSR3-201ENST00000265044 DAOAP59103 153 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 PRPSAP1Q14558 356 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 CA9Q16790 459 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 RPAINQ86UA6 219 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 NIPA2Q8N8Q9 360 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 CCDC63Q8NA47 563 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 ATP6V1G3Q96LB4 118 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 DDX23Q9BUQ8 820 aaKnown RBP9.66□□□□□ -0.86
SSR3-201ENST00000265044 NRDE2Q9H7Z3 1164 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 PCDH9Q9HC56 1237 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 PRM3Q9NNZ6 103 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 OR12D3Q9UGF7 316 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 PCDHB8Q9UN66 801 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 CHMP2BQ9UQN3 213 aa9.66□□□□□ -0.86
SSR3-201ENST00000265044 SLC12A8A0AV02 714 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 IRF1P10914 325 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 PECAM1P16284 738 aaPredicted RBP9.65□□□□□ -0.86
SSR3-201ENST00000265044 PAX3P23760 479 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 MSH2P43246 934 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 GABRB2P47870 512 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 HDAC4P56524 1084 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 MGAT3Q09327 533 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 PTK6Q13882 451 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 PRSS55Q6UWB4 352 aaPredicted RBP9.65□□□□□ -0.86
SSR3-201ENST00000265044 ANKS3Q6ZW76 656 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 STRADAQ7RTN6 431 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 PPIL6Q8IXY8 311 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 NUP93Q8N1F7 819 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 GSTCDQ8NEC7 633 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 SPON2Q9BUD6 331 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 ABCC13Q9NSE7 274 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 LCTP09848 1927 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 DAB1O75553 588 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 MX2P20592 715 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 HSPA9P38646 679 aaKnown RBP9.65□□□□□ -0.86
SSR3-201ENST00000265044 DPYSL3Q14195 570 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 USP41Q3LFD5 358 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 TRMT10CQ7L0Y3 403 aaKnown RBP9.65□□□□□ -0.86
SSR3-201ENST00000265044 UNC45BQ8IWX7 931 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 TMEM199Q8N511 208 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 OLIG1Q8TAK6 271 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 ZNF558Q96NG5 402 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 SEZ6LQ9BYH1 1024 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 RRN3Q9NYV6 651 aa9.65□□□□□ -0.86
SSR3-201ENST00000265044 TRPM7Q96QT4 1865 aa9.65□□□□□ -0.87
SSR3-201ENST00000265044 A0A0G2JMZ2 1700 aa9.65□□□□□ -0.87
SSR3-201ENST00000265044 MSI1O43347 362 aaKnown RBP9.65□□□□□ -0.87
SSR3-201ENST00000265044 KIAA0754O94854 1291 aa9.65□□□□□ -0.87
SSR3-201ENST00000265044 TYMPP19971 482 aa9.65□□□□□ -0.87
SSR3-201ENST00000265044 PTPN9P43378 593 aa9.65□□□□□ -0.87
SSR3-201ENST00000265044 SLC25A11Q02978 314 aaKnown RBP9.65□□□□□ -0.87
SSR3-201ENST00000265044 CLLU1OSQ5K130 101 aa9.65□□□□□ -0.87
SSR3-201ENST00000265044 SLC39A5Q6ZMH5 540 aa9.65□□□□□ -0.87
SSR3-201ENST00000265044 CHSY1Q86X52 802 aa9.65□□□□□ -0.87
SSR3-201ENST00000265044 SRRM1Q8IYB3 904 aaKnown RBP9.65□□□□□ -0.87
SSR3-201ENST00000265044 CXorf38Q8TB03 319 aa9.65□□□□□ -0.87
SSR3-201ENST00000265044 BHMTQ93088 406 aa9.65□□□□□ -0.87
SSR3-201ENST00000265044 RPRD1AQ96P16 312 aaPredicted RBP9.65□□□□□ -0.87
SSR3-201ENST00000265044 HERPUD2Q9BSE4 406 aa9.65□□□□□ -0.87
SSR3-201ENST00000265044 DNALI1O14645 258 aaPredicted RBP9.64□□□□□ -0.87
SSR3-201ENST00000265044 TRIM66O15016 1216 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 NBNO60934 754 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 PFKMP08237 780 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 TGM2P21980 687 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 ADRA1BP35368 520 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 PTGIRP43119 386 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 SLC11A1P49279 550 aa9.64□□□□□ -0.87
SSR3-201ENST00000265044 DRG2P55039 364 aaKnown RBP9.64□□□□□ -0.87
SSR3-201ENST00000265044 GBE1Q04446 702 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms